DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jhbp4 and Jhbp1

DIOPT Version :10

Sequence 1:NP_650518.1 Gene:Jhbp4 / 41948 FlyBaseID:FBgn0038394 Length:270 Species:Drosophila melanogaster
Sequence 2:NP_649509.1 Gene:Jhbp1 / 40613 FlyBaseID:FBgn0037290 Length:246 Species:Drosophila melanogaster


Alignment Length:252 Identity:67/252 - (26%)
Similarity:115/252 - (45%) Gaps:10/252 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SICLITVTHGAYTREIVNDKLPLQERPSWLQTCKRSNPNEDKCFRQLFEGCFPALAAGIPEIGVK 83
            ::||:.|....        ::...|.|.:::.|.|::|....||....|...|.||.|||:|.:.
  Fly     4 AVCLVIVIQAL--------RMVQAETPPYIKQCHRNDPKLVDCFIGAIEHLKPYLANGIPDIQLP 60

  Fly    84 SFEPLNIDQVSVSKGSGNLVLSGGFQDLVIRGPSNATVRRASLDLERRLLNFELELPRLRIRAKY 148
            |.||..:|.:::....|........:::...|.||..|....|.........::.:|:|:|.|||
  Fly    61 SVEPFKMDTLALQLTEGPQGYKITLKNMEAFGASNFKVTSLKLSEGSEPFKAKIVMPKLKIEAKY 125

  Fly   149 NLKGNILLLPLVGSGDVAMALKNVHTTVYTRISLRNETRTGDEIIHIDEMKVGFDVGAMRIHLKN 213
            ...|.:|:||..|.||.....:.|...:..:.|:  ....|...:|||.:.:..||..:::.:..
  Fly   126 TSSGVLLILPASGGGDFHANFEGVSADLTGKTSI--HAFKGANYLHIDALSLVLDVKDVKMSISG 188

  Fly   214 LFNGNEILAASINSFLNQNGKEVIAELRPDLELGLADIFHGLWNNVFSKMPTKLWLV 270
            .||.|.||..:.|.||.:|.:.|:..::..|:..||..|..|.|.:...:|.:.:.|
  Fly   189 AFNNNRILLEATNLFLRENSQVVLEAMQAQLQKKLASEFGKLANQLLKNVPVEQFYV 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jhbp4NP_650518.1 JHBP 42..270 CDD:214779 63/227 (28%)
Jhbp1NP_649509.1 JHBP 7..244 CDD:461956 65/246 (26%)

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