DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and GAT1

DIOPT Version :9

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_116632.1 Gene:GAT1 / 850523 SGDID:S000001873 Length:510 Species:Saccharomyces cerevisiae


Alignment Length:335 Identity:81/335 - (24%)
Similarity:137/335 - (40%) Gaps:82/335 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 FSNFHPQVIDEYGSGNMS--TSHWPPASSIGQYDGSLVTASSTSSPNHELKCENCHGPFLRKGSE 501
            |:|..|.:.:...:.|.|  :||...:.||.....:....::::|       .|.:.|.||:...
Yeast   205 FTNNLPFLNNNSINNNHSHNSSHNNNSPSIANNTNANTNTNTSAS-------TNTNSPLLRRNPS 262

  Fly   502 YFCPNCPAFMRMAPR--ITQRQAKP------------KAAAAPNNRRNG--VTCANCQTNSTTLW 550
                  |:.::...|  .:.|:.||            .:|..|:|..:.  :.|:||.|::|.||
Yeast   263 ------PSIVKPGSRRNSSVRKKKPALKKIKSSTSVQSSATPPSNTSSNPDIKCSNCTTSTTPLW 321

  Fly   551 RRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKR---KPKNNGGAPMHRAPLPSMSQGVNL 612
            |::.:|.|:||||||:.|||.:.||||:|.:.|:||:|   |..||      ..|.||.|.....
Yeast   322 RKDPKGLPLCNACGLFLKLHGVTRPLSLKTDIIKKRQRSSTKINNN------ITPPPSSSLNPGA 380

  Fly   613 MANSPLYPSQVPVSMLNSQLN------SQQNSSPELHDMSTTGQAGGQRVVSISLNATAPPTPDG 671
            ......|.:.|..|...:.||      ||....|::                      |.|:...
Yeast   381 AGKKKNYTASVAASKRKNSLNIVAPLKSQDIPIPKI----------------------ASPSIPQ 423

  Fly   672 TLNMSARHH------VTGESHSPY-SQQSTPQSQSPHLPGTVPINRQIV-QPVPTI------ESS 722
            .|..:.|||      :..|:.|.: ...:...:.:.|...|...|.:.. :|:.:.      :::
Yeast   424 YLRSNTRHHLSSSVPIEAETFSSFRPDMNMTMNMNLHNASTSSFNNEAFWKPLDSAIDHHSGDTN 488

  Fly   723 RSSNTELTPS 732
            .:||...||:
Yeast   489 PNSNMNTTPN 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 24/50 (48%)
ZnF_GATA 538..589 CDD:238123 28/53 (53%)
GAT1NP_116632.1 GAT1 1..495 CDD:227928 79/330 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2600
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 1 1.000 - - mtm9213
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10071
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.860

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