DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and PRR3

DIOPT Version :10

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001190575.1 Gene:PRR3 / 836132 AraportID:AT5G60100 Length:522 Species:Arabidopsis thaliana


Alignment Length:371 Identity:68/371 - (18%)
Similarity:108/371 - (29%) Gaps:123/371 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 IYSVPGTGQFLAKSESGL-------------------------NQTGLLRQTGPATFQTISFEGG 419
            ||...|:|     ||||:                         |::|   .:|..:.|....:.|
plant   213 IYQSSGSG-----SESGIHDKKSVKPESTQGSENDASISDEHRNESG---SSGGLSNQDGGSDNG 269

  Fly   420 NGIEPLWASPAPPEYQSVQFSNFHPQVIDEYGSGNMSTSHWPPASSIGQYDGSLVTASSTSSPNH 484
            :|.:..|...| .:.:|...||..|...::.|:.....:|.............:.|.|.|     
plant   270 SGTQSSWTKRA-SDTKSTSPSNQFPDAPNKKGTYENGCAHVNRLKEAEDQKEQIGTGSQT----- 328

  Fly   485 ELKCENCHGPFLRKGSEYFCPNCPAFMRMAPRITQRQAKPKAAAAPNNRRNGVTCANCQTNSTTL 549
                    |..:.|.:|            .|...::.||....|...|            |..||
plant   329 --------GMSMSKKAE------------EPGDLEKNAKYSVQALERN------------NDDTL 361

  Fly   550 WRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPK---------------------NN 593
            .|  :.||....:     |..:.||......|...|:.|:.:                     ||
plant   362 NR--SSGNSQVES-----KAPSSNREDLQSLEQTLKKTREDRDYKVGDRSVLRHSNLSAFSKYNN 419

  Fly   594 GGAPMHRAPLPSMSQGVNLMANSPLYPSQVPVSMLNSQLNSQQNSSPELHDMSTTGQAGGQRVVS 658
            |.....:||..::..         ..|...|::.|   |.|..:|...|...|:......||  .
plant   420 GATSAKKAPEENVES---------CSPHDSPIAKL---LGSSSSSDNPLKQQSSGSDRWAQR--E 470

  Fly   659 ISLNATAPPTPDGTLNMSARHHVTGESHSPYSQQSTPQSQSPHLPG 704
            .:|........:.......|:|         |::...: |.||:.|
plant   471 AALMKFRLKRKERCFEKKVRYH---------SRKKLAE-QRPHVKG 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 GAT1 <533..644 CDD:227928 24/131 (18%)
ZnF_GATA 538..589 CDD:238123 11/50 (22%)
PRR3NP_001190575.1 psREC_PRR 66..169 CDD:381120
MSCRAMM_ClfA <233..454 CDD:468110 48/280 (17%)
CCT 469..511 CDD:461849 9/50 (18%)
Blue background indicates that the domain is not in the aligned region.

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