DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and AT2G46670

DIOPT Version :10

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_182190.2 Gene:AT2G46670 / 819279 AraportID:AT2G46670 Length:183 Species:Arabidopsis thaliana


Alignment Length:146 Identity:26/146 - (17%)
Similarity:50/146 - (34%) Gaps:31/146 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MEQQTTQQQQQQQQQQQQQQQLQQQQHQALTKQQLQLLDKIKLESSNGADQLAQQTANNLDEQQE 80
            :|:.|:.:.:...:..::.::::..|..:.|...   .:.|...|.:..:|:.|.|..|      
plant    20 LEESTSGEPKTPTESHEKLRKVRSDQGSSTTSSN---QENIGSSSVSFRNQVLQSTVTN------ 75

  Fly    81 QQQQHQQQAATSVGVVVQTGQAGVSEPEEQYVVVPRNQRRILTTAGTLELNEAREGEPSTNASNA 145
                  |:..:.:.|.....:|...|.|                ||:...||...|:.|:.....
plant    76 ------QKQDSPIPVESNREKAASKEVE----------------AGSQSTNEGIAGQSSSTEKPK 118

  Fly   146 SSGSASDSHIEYQRSA 161
            ...||.......||.|
plant   119 EEESAKQRWSRSQREA 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 GAT1 <533..644 CDD:227928
ZnF_GATA 538..589 CDD:238123
AT2G46670NP_182190.2 CCT 132..173 CDD:461849 2/3 (67%)
Blue background indicates that the domain is not in the aligned region.

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