DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and RR14

DIOPT Version :10

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001324402.1 Gene:RR14 / 814707 AraportID:AT2G01760 Length:410 Species:Arabidopsis thaliana


Alignment Length:182 Identity:33/182 - (18%)
Similarity:60/182 - (32%) Gaps:58/182 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 NESKTYADLGNAYAPFPPSSSFSSNSYAATLQQGNTIYSVPGTGQFL-AKSESG----------- 396
            ||.....|.||:                   ::...::|:....||: |.::.|           
plant   215 NEDDLLLDPGNS-------------------KKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILE 260

  Fly   397 -LNQTGLLRQTGPATFQ-------TISFEGGNGIEPLWASPAPPEYQSVQ----FSNFHPQV--- 446
             :|..||.|:...:..|       .:|.|.....:    |.:...|:::|    ....|||.   
plant   261 LMNVPGLSRENVASHLQKFRLYLKRLSGEASQSND----SESTKRYENIQALVSSGQLHPQTLAA 321

  Fly   447 -----IDEYGSGNMSTSHWPPASSIGQYDGSLVTASSTSSPNHELKCENCHG 493
                 ||.:.|.:...  |.|..::|:......:...:|:.|..:... .||
plant   322 LFGQPIDNHHSASFGV--WIPNDNLGRSQNEHFSVDVSSASNRPVSVA-VHG 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 GAT1 <533..644 CDD:227928
ZnF_GATA 538..589 CDD:238123
RR14NP_001324402.1 REC_typeB_ARR-like 13..156 CDD:381121
PLN03162 <147..>293 CDD:178707 17/96 (18%)
myb_SHAQKYF 228..281 CDD:130620 10/52 (19%)
Blue background indicates that the domain is not in the aligned region.

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