DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GATAe and TRPS1

DIOPT Version :9

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_054831.2 Gene:TRPS1 / 7227 HGNCID:12340 Length:1294 Species:Homo sapiens


Alignment Length:929 Identity:182/929 - (19%)
Similarity:295/929 - (31%) Gaps:377/929 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LESS--NGAD----------QLAQQTANNLDEQQEQQQQHQQQAATSVGVVVQTGQAGVSEPE-- 108
            |:||  ||.:          ..:.:::::|...:...:||        |.|    |:|...||  
Human   433 LDSSRQNGTEATSYYWCKFCSFSCESSSSLKLLEHYGKQH--------GAV----QSGGLNPELN 485

  Fly   109 ---EQYVVVPRNQRRILTTAGTLELNEAREGEPSTNASNASSGS---------ASDSHI------ 155
               .:..|:.:|           :|.::.|||..|....:|||:         |.|:.:      
Human   486 DKLSRGSVINQN-----------DLAKSSEGETMTKTDKSSSGAKKKDFSSKGAEDNMVTSYNCQ 539

  Fly   156 --EYQRSAHQSPGA-------THYVQM-------------APRN--------AEVTEQVGAAAGA 190
              :::.|....|..       .||.|:             .||.        .|:|         
Human   540 FCDFRYSKSHGPDVIVVGPLLRHYQQLHNIHKCTIKHCPFCPRGLCSPEKHLGEIT--------- 595

  Fly   191 PPGTIFAYPIICNGDDVA--AIKIETLEKGEATGESQQQQQQLQQHQHQQQQQC--PTPN----- 246
                   ||..|...:.:  |:.:..|..| |.|.|:.:         .|..||  .||:     
Human   596 -------YPFACRKSNCSHCALLLLHLSPG-AAGSSRVK---------HQCHQCSFTTPDVDVLL 643

  Fly   247 ----GASYGETIVISSEAEALQHHHQQQQQHQQQQH-------------------QQQHHQHQAA 288
                .....:...:..||..||....||...:.::|                   ::.|..::..
Human   644 FHYESVHESQASDVKQEANHLQGSDGQQSVKESKEHSCTKCDFITQVEEEISRHYRRAHSCYKCR 708

  Fly   289 AAASAAAQTVHIATSSHGGTVRFVTEDVRFTTAGPETS--ASNMYYDVPVVDGSVHANESKTYAD 351
            ..:..||.|..:.  .|..||....:|:  |||..|..  |.:...:.|.:|..|          
Human   709 QCSFTAADTQSLL--EHFNTVHCQEQDI--TTANGEEDGHAISTIKEEPKIDFRV---------- 759

  Fly   352 LGNAYAPFPPSSSFSSNSYAATLQQGNTIYSVPGTGQFLAKSESGLNQTGLLRQTGPATFQTISF 416
                |....|.|           :.|..:            |||.:.:..|              
Human   760 ----YNLLTPDS-----------KMGEPV------------SESVVKREKL-------------- 783

  Fly   417 EGGNGI-EPLWASPAPPEYQSVQFSNFHPQVIDEYGSGNMSTSHWPPASSIGQY----------- 469
            |..:|: |.:|...:..:.::|.:.          |:..:..|.....:|:|..           
Human   784 EEKDGLKEKVWTESSSDDLRNVTWR----------GADILRGSPSYTQASLGLLTPVSGTQEQTK 838

  Fly   470 ---DGSLVTASSTSSPNHELKCENCHGPFLRKGSEYFCPNCP-------AFMRMAPRITQRQAKP 524
               |...|.|:..:.|.:.|..|.       ||   |....|       |..:..|...:.::|.
Human   839 TLRDSPNVEAAHLARPIYGLAVET-------KG---FLQGAPAGGEKSGALPQQYPASGENKSKD 893

  Fly   525 KAAAAPNNRR-NGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEG-----I 583
            ::.:....|| :||.||||.|..|:|||:|..|..||||||||.|||:..|||::.|:.     |
Human   894 ESQSLLRRRRGSGVFCANCLTTKTSLWRKNANGGYVCNACGLYQKLHSTPRPLNIIKQNNGEQII 958

  Fly   584 QKRKRKPKNN--------------------GGAPMHR-------------APLPSMS----QGVN 611
            ::|.||..|.                    .|:|:.|             .||||:|    ||..
Human   959 RRRTRKRLNPEALQAEQLNKQQRGSNEEQVNGSPLERRSEDHLTESHQREIPLPSLSKYEAQGSL 1023

  Fly   612 LMANSPLYPSQVPVSM--------LNSQLNSQQNSSPELHDMSTTGQAGGQRVVSISLNATAPPT 668
            ..::|...|..|..::        |:.|:.|.|.|         ||..|....||....::...:
Human  1024 TKSHSAQQPVLVSQTLDIHKRMQPLHIQIKSPQES---------TGDPGNSSSVSEGKGSSERGS 1079

  Fly   669 PDGTLNMSARH----------------------------------------------------HV 681
            |.......|:|                                                    ||
Human  1080 PIEKYMRPAKHPNYSPPGSPIEKYQYPLFGLPFVHNDFQSEADWLRFWSKYKLSVPGNPHYLSHV 1144

  Fly   682 TG-----ESHSPYSQQSTPQSQSPHLPGT-----VPINRQI--VQPVPTIESSRSSNTELTPSV- 733
            .|     :::.||...:.|    ||....     :|::..|  .:|.||...:....|:..|:| 
Human  1145 PGLPNPCQNYVPYPTFNLP----PHFSAVGSDNDIPLDLAIKHSRPGPTANGASKEKTKAPPNVK 1205

  Fly   734 ------ITRTGLPERSSNN 746
                  :.:|...:||:.:
Human  1206 NEGPLNVVKTEKVDRSTQD 1224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 29/54 (54%)
ZnF_GATA 538..589 CDD:238123 28/55 (51%)
TRPS1NP_054831.2 ZnF_GATA 904..947 CDD:214648 26/42 (62%)
ZnF_GATA 908..964 CDD:238123 28/55 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.