DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and gata1b

DIOPT Version :10

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_021334219.2 Gene:gata1b / 564960 ZFINID:ZDB-GENE-081104-43 Length:383 Species:Danio rerio


Alignment Length:404 Identity:112/404 - (27%)
Similarity:163/404 - (40%) Gaps:96/404 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 VHANESKTYADLGNAYAPFPPSSSFSSNSYA---ATLQQGNT--IYSVPGTGQF-LAKSESGLNQ 399
            :|..|:..:......::..|  |.|||..::   |..|....  |||.|..|.. ..:..||.:.
Zfish    38 LHGEEASIFPCTDADHSGLP--SLFSSPVHSRPTAAFQHSPVYPIYSSPFLGNLSWLEGSSGSSL 100

  Fly   400 TGLLRQTGPATFQTISFEGGNGIEPLWASPAPPEYQSVQFSNFHP----------QVIDEYGSGN 454
            |... .:.|:::.:.:|...:......:|..|.:.:||:.....|          .:...|...:
Zfish   101 TNYF-PSSPSSWHSSAFSKASSSSFSSSSARPEQKESVKGERSSPPGGGLFPLNSSLSGVYPHSH 164

  Fly   455 MSTSHWPPASSIGQ-YDGSLVTASST----------SSPNHELKCENCHG---PFLRKG--SEYF 503
            .:.:|:.|.....| |..||:.|.:|          .||....:|.||..   |..|:.  ..|.
Zfish   165 STKTHYSPYGGHTQDYSSSLLYAPATFTPKLCSKMNFSPLDARECVNCGATATPLWRRDGTGHYL 229

  Fly   504 CPNCPAFMRM----APRITQRQAKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACG 564
            |..|..:.:|    .|.|     :||..... ::|.|..||||||::|||||||:.|.|||||||
Zfish   230 CNACGLYHKMNGQNRPLI-----RPKKRPVV-SKRIGTQCANCQTSTTTLWRRNSSGEPVCNACG 288

  Fly   565 LYYKLHNMNRPLSMKKEGIQKRKRK--PKNNGGAPMHRAPLPSMSQGVNLMANSPLYPSQVPVSM 627
            ||:||||:||||:|||||||.|.||  .||..|     ....:|.:  ||..:.|..|:      
Zfish   289 LYFKLHNVNRPLAMKKEGIQTRNRKVSSKNRKG-----KKFSTMEE--NLYCDFPKTPA------ 340

  Fly   628 LNSQLNSQQNSSPELHDMSTTGQAGGQRVVSISLNATAPPTPDGTLNMSARHHVTGESHSPYSQQ 692
            .:...:....|...|...|.:||:                                .::.||...
Zfish   341 CDQHFDMYSQSPAALGVYSHSGQS--------------------------------TAYLPYPYH 373

  Fly   693 STPQSQSPHLPGTV 706
            |:|..    ||.||
Zfish   374 SSPAV----LPSTV 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 GAT1 <533..644 CDD:227928 53/112 (47%)
ZnF_GATA 538..589 CDD:238123 39/50 (78%)
gata1bXP_021334219.2 GAT1 136..>247 CDD:227928 24/110 (22%)
ZnF_GATA 208..254 CDD:238123 13/50 (26%)
ZnF_GATA 262..313 CDD:238123 39/50 (78%)

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