DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and Gata5

DIOPT Version :10

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001019487.1 Gene:Gata5 / 499951 RGDID:1561365 Length:404 Species:Rattus norvegicus


Alignment Length:369 Identity:107/369 - (28%)
Similarity:145/369 - (39%) Gaps:99/369 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 TYADLGNAYAPFPPSSSFSSNSYAATLQQGNTIYSVPGTGQFLAKSESGLNQTGLLRQTGPATFQ 412
            ||||.|    ||..||...|..:.|..:       ||....:|...|.|.....|...:  :..|
  Rat    15 TYADSG----PFLHSSGAGSPVFVAPTR-------VPSMLPYLPSCEPGSQPPALAAHS--SWTQ 66

  Fly   413 TISFEG---GNGIEPLWASPAPPEYQSVQFSNFHPQVIDEYGSGN-------------------- 454
            .:|.|.   |:|      ||.||.......:.| |......|||:                    
  Rat    67 AVSAESSAFGSG------SPHPPATHPPGATAF-PFAHSPSGSGSGGSAGVRDGAAFQSALLARE 124

  Fly   455 ---------MSTSH---WP--------PASSIGQYDGSL------------------VTASSTSS 481
                     ||.|:   :|        |:.:.|.:|.|:                  |.......
  Rat   125 QYPTALGRPMSASYPTTYPAYVSPDVAPSWTSGPFDSSILHGLQGRPGGLPGRRTTFVPDFLEEF 189

  Fly   482 PNHELKCENCHG---PFLRKG--SEYFCPNCPAFMRMAPRITQRQAKPKAAAAPNNRRNGVTCAN 541
            |....:|.||..   |..|:.  ..|.|..|..:.:| ..:.:...:|:...: ::||:|:.|:|
  Rat   190 PGEGRECVNCGALSTPLWRRDGTGHYLCNACGLYHKM-NGVNRPLVRPQKRLS-SSRRSGLCCSN 252

  Fly   542 CQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKN-------NGGAPMH 599
            |.|.:|||||||.||.|||||||||.|||.:.|||:||||.||.|||||||       :|.....
  Rat   253 CHTATTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKNPAKIKGSSGSTANS 317

  Fly   600 RAPLPSM----SQGVNLMANSPLYPSQVPVSMLNSQLNSQQNSS 639
            .|..|::    |....|.|.|.|.........:.||.:|..:.|
  Rat   318 TASSPTLLNTESSATTLKAESSLASPGCAGPTITSQASSPADES 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 GAT1 <533..644 CDD:227928 56/118 (47%)
ZnF_GATA 538..589 CDD:238123 36/50 (72%)
Gata5NP_001019487.1 GATA-N 1..181 CDD:461628 39/185 (21%)
ZnF_GATA 195..239 CDD:238123 10/44 (23%)
ZnF_GATA 250..300 CDD:238123 36/49 (73%)

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