DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and gata5

DIOPT Version :9

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_031749920.1 Gene:gata5 / 496852 XenbaseID:XB-GENE-484906 Length:437 Species:Xenopus tropicalis


Alignment Length:483 Identity:129/483 - (26%)
Similarity:181/483 - (37%) Gaps:151/483 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 LQQHQHQQQQQCPTPNGASYGETI-------VISSEAE---------------ALQHHHQQQQQH 273
            :.::||.:.|:....:|..|..|.       |...:|:               ||..:|.|    
 Frog     1 MPENQHWKMQKDCRLSGTFYYNTTSSANLPGVAGRKAQPVLFGSYRRIMYPSLALTANHAQ---- 61

  Fly   274 QQQQHQQQHHQHQAAAAASAAAQTVHIATS-------------------------SHGGTVRFVT 313
            ....|...:..|      |..:..|::.||                         :|.|..:...
 Frog    62 PAYSHDPSNFLH------STGSPPVYVPTSRMPAMLQSLPYLQSCDTAHQGHHLGNHPGWAQTAN 120

  Fly   314 EDVRFTTAGPETSASNMYYDVPVVDGSVHANESKTYADLGNAYAPFPPSSSFSSNSYAATLQQGN 378
            |...|..:.|.|.:...|...|.| |:..|.|       |...:|....||       |..|.||
 Frog   121 ESHTFNASSPHTPSGFPYSHSPPV-GNASARE-------GAYQSPLIMGSS-------ARDQYGN 170

  Fly   379 TIYSVPGTGQFLAK-SESGLNQTGLLRQTGPATFQTISFEGG-----NGIEPLWASPAPPEYQSV 437
               |:..||.:.:. |..|.:.        |.::.|..|||.     .|.:||     |....|:
 Frog   171 ---SLVRTGSYPSPYSYVGADM--------PPSWATGHFEGSMLHSLQGRQPL-----PGRRSSL 219

  Fly   438 QF-SNFHPQVIDEYGSGNMSTSHWPPASSIGQYDGSLVTASSTSSPNHELKCENCHGPFLRKGSE 501
            :| ..||.:..:....|.|||..|       :.||:                           ..
 Frog   220 EFLEEFHGEGRECVNCGAMSTPLW-------RRDGT---------------------------GH 250

  Fly   502 YFCPNCPAFMRMAPRITQRQAKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLY 566
            |.|..|..:.:| ..|.:...||:...: ::||.|:.|.||.|::|||||||:||.|||||||||
 Frog   251 YLCNACGLYHKM-NGINRPLIKPQKRLS-SSRRAGLCCTNCHTSTTTLWRRNSEGEPVCNACGLY 313

  Fly   567 YKLHNMNRPLSMKKEGIQKRKRKPK---------------NNGGAPMHRAPLPSMSQGVNLMANS 616
            .|||.:.|||:||||.||.||||||               |:..:..:..|.|.:....|:.:. 
 Frog   314 MKLHGVPRPLAMKKESIQTRKRKPKNVSKGKTSTGSTSATNSPSSVTNSDPTPVLKTEPNIASQ- 377

  Fly   617 PLYPSQ--VPVSMLNSQLNSQQNSSPEL 642
              ||.|  |.||...||.:...|.|.||
 Frog   378 --YPGQAIVAVSQGQSQTDDLVNGSHEL 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 34/48 (71%)
ZnF_GATA 538..589 CDD:238123 36/50 (72%)
gata5XP_031749920.1 GATA-N 49..219 CDD:398818 44/210 (21%)
ZnF_GATA 231..275 CDD:238123 14/78 (18%)
ZnF_GATA 286..336 CDD:238123 36/49 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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