DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and gata5

DIOPT Version :9

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_571310.2 Gene:gata5 / 30482 ZFINID:ZDB-GENE-980526-340 Length:383 Species:Danio rerio


Alignment Length:429 Identity:122/429 - (28%)
Similarity:166/429 - (38%) Gaps:129/429 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 SVHANESKTYADLGNAYAPFPPSSSFSSNSYAATLQQGNTIYSVPGTGQFLAKSES-----GLNQ 399
            ::.:|.|....|.||...|     |.||..|..|.:....:.::|    :|...||     |::.
Zfish     6 ALSSNPSPYAHDSGNYIHP-----SASSPVYVPTTRVPAMLQTLP----YLQTCESSHQAHGISS 61

  Fly   400 TGLLRQTGPATFQTISFEGGNGIEPLWASPAPPEYQSVQFSNFH-PQV----------------- 446
            .....|||.   ...||..|        ||.||.    .||..| |.|                 
Zfish    62 HHAWPQTGT---DNSSFNPG--------SPHPPP----GFSYSHSPPVSSSTGRDAAYQNPLMLS 111

  Fly   447 ----IDEYGSG-------------------NMSTSHWPPASSIGQYDGSLVTASSTSS------- 481
                .|:|||.                   .|:|| |.|    |.:||.::.......       
Zfish   112 NGGRADQYGSALVRSVGGSYSSPYAAYMSPEMATS-WTP----GPFDGGMIGLQGRQGTLPGRRS 171

  Fly   482 --------PNHELKCENCHG---PFLRKG--SEYFCPNCPAFMRMAPRITQRQAKPKAAAAPNNR 533
                    |....:|.||..   |..|:.  ..|.|..|..:.:| ..|.:...||:......:|
Zfish   172 SIDMLDDLPCEGRECVNCGSISTPLWRRDGTGHYLCNACGLYHKM-NGINRPLIKPQKRLQSTSR 235

  Fly   534 RNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNNGGAPM 598
            |.|:.|.||.|::|||||||.||.|||||||||.|||.:.|||:||||.||.||||||       
Zfish   236 RAGLCCTNCHTSTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPK------- 293

  Fly   599 HRAPLPSMSQGVNLMANSPLYPSQVPVSMLNSQLNSQQN--SSPELHDMSTTGQAGGQRVVSISL 661
                :|..........:....|:.:|||...|.:.|:.:  :||          ..||.|||::.
Zfish   294 ----MPKTKSSSGSTVSGATSPTSLPVSENASTIKSEPSIAASP----------YAGQTVVSVTQ 344

  Fly   662 NATAPPTPDGTLNMSARHHVTGESHSPYSQQSTPQSQSP 700
            .:|       .|:.::..|| ...:..|:.  ||.|.:|
Zfish   345 AST-------QLDSASSAHV-DIKYEDYTY--TPTSIAP 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 34/48 (71%)
ZnF_GATA 538..589 CDD:238123 36/50 (72%)
gata5NP_571310.2 GATA-N 1..173 CDD:283099 43/195 (22%)
ZnF_GATA 182..228 CDD:214648 12/46 (26%)
ZnF_GATA 185..236 CDD:238123 12/51 (24%)
ZnF_GATA 236..285 CDD:214648 34/48 (71%)
ZnF_GATA 241..291 CDD:238123 36/49 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.770

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