DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GATAe and GATA4

DIOPT Version :9

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001295022.1 Gene:GATA4 / 2626 HGNCID:4173 Length:443 Species:Homo sapiens


Alignment Length:460 Identity:128/460 - (27%)
Similarity:181/460 - (39%) Gaps:136/460 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   284 QHQAAAAASAAAQTVHIATSSHGGTVRFVTEDVRFTTAGPETSASNMYYDVPVVDGSVHANESKT 348
            |...|.:||..|     :..|.||..         :.|||.|...:..:.....||:        
Human    55 QGGGAGSASGGA-----SGGSSGGAA---------SGAGPGTQQGSPGWSQAGADGA-------- 97

  Fly   349 YADLGNAYAPFPPSSSFSSNSYAATLQQGNTIYSVPGTGQFLA--------------KSESGLNQ 399
                  ||.|.|.|..|                |.|||...||              .|..|...
Human    98 ------AYTPPPVSPRF----------------SFPGTTGSLAAAAAAAAAREAAAYSSGGGAAG 140

  Fly   400 TGLLRQTGPATFQTISFEGGNGIEPLWASPAPPEYQSVQFSNFHPQVIDEYGSGNMSTSHW--PP 462
            .||   .|...:....|.|.      ::||             :|..:.:.|:.      |  ..
Human   141 AGL---AGREQYGRAGFAGS------YSSP-------------YPAYMADVGAS------WAAAA 177

  Fly   463 ASSIGQYDGSLVTA------SSTSSPN---------HELKCENCHG---PFLRKG--SEYFCPNC 507
            |:|.|.:|..::.:      .:...||         ...:|.||..   |..|:.  ..|.|..|
Human   178 AASAGPFDSPVLHSLPGRANPAARHPNLVDMFDDFSEGRECVNCGAMSTPLWRRDGTGHYLCNAC 242

  Fly   508 PAFMRMAPRITQRQAKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNM 572
            ..:.:| ..|.:...||:...:. :||.|::||||||.:|||||||.||.|||||||||.|||.:
Human   243 GLYHKM-NGINRPLIKPQRRLSA-SRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGV 305

  Fly   573 NRPLSMKKEGIQKRKRKPKNNGGAPMHRAPLPSMSQGVNLMANSPLYPSQVPVSMLNSQLNSQQN 637
            .|||:|:|||||.|||||||     ::::..|:...|     :..|.|:....|  ||. |:..:
Human   306 PRPLAMRKEGIQTRKRKPKN-----LNKSKTPAAPSG-----SESLPPASGASS--NSS-NATTS 357

  Fly   638 SSPELHDMST----TGQAGGQRVVS--ISLNATAPPTPD-----GTLNMSARHHVTGESHSPYSQ 691
            ||.|:..:.|    :...|....||  .|::|.:...|.     ..|.:|.:.:.:..|.||  |
Human   358 SSEEMRPIKTEPGLSSHYGHSSSVSQTFSVSAMSGHGPSIHPVLSALKLSPQGYASPVSQSP--Q 420

  Fly   692 QSTPQ 696
            .|:.|
Human   421 TSSKQ 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 35/48 (73%)
ZnF_GATA 538..589 CDD:238123 38/50 (76%)
GATA4NP_001295022.1 GATA-N 1..205 CDD:368398 43/221 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..107 17/74 (23%)
ZnF_GATA 217..267 CDD:238123 12/51 (24%)
ZnF_GATA 271..322 CDD:238123 38/50 (76%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 315..379 23/76 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 410..429 6/18 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148043
Domainoid 1 1.000 41 1.000 Domainoid score I12499
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2600
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
76.650

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