DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and Gata1

DIOPT Version :10

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_036896.1 Gene:Gata1 / 25172 RGDID:2663 Length:413 Species:Rattus norvegicus


Alignment Length:430 Identity:115/430 - (26%)
Similarity:162/430 - (37%) Gaps:114/430 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 VRFVTEDVRFTTAGPE---TSASNMYYDVPVVDGSVHA--NESKTYA--------DLGNAYAPFP 360
            |...::...|.::|||   |::|:...:......:..|  .|::.|.        .|.|:....|
  Rat    24 VSSTSDSAGFFSSGPESLDTASSSTSPNAATAAATALAYYREAEAYRHSPVFQVYPLLNSMEGIP 88

  Fly   361 PSSSFSSNSYAAT-LQQGNTIYSVPGTGQFLAKSESGLNQTGLLRQTGPATFQTISFEGGNG--- 421
            .||.::|.:|:.| |...:|:  .|.                  .:..|:  ||:....|..   
  Rat    89 GSSPYASWAYSKTALYPASTV--CPS------------------HEDAPS--QTLEDPDGKNNNT 131

  Fly   422 -IEPLWASPAPPEYQSV--QFSNFHPQVIDEYGSGNMSTSHWPP--------ASSIGQYDGSLVT 475
             :|.|......|:..::  ......|.....||..:..:..:.|        |.|..::.|||..
  Rat   132 FLETLKTERLSPDLLTLGTALPTSLPVTSSAYGGADFPSPFFSPTGSPLSSAAYSSPKFHGSLPL 196

  Fly   476 ASSTSSPNHELKCENCHG---PFLRKG--SEYFCPNCPAFMRM----APRITQRQAKPKAAAAPN 531
            |     |....:|.||..   |..|:.  ..|.|..|..:.:|    .|.|     :||..... 
  Rat   197 A-----PCEARECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPLI-----RPKKRMIV- 250

  Fly   532 NRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNNG-- 594
            ::|.|..|.||||.:|||||||..|:|||||||||||||.:||||:|:|:|||.|.||....|  
  Rat   251 SKRAGTQCTNCQTTTTTLWRRNASGDPVCNACGLYYKLHQVNRPLTMRKDGIQTRNRKASGKGKK 315

  Fly   595 -------GAPMHRAP-------------------LPSMSQGVNLMANSPLYPSQVPVSMLNSQLN 633
                   ||.....|                   .|.::.|.  ...:.||....||.:      
  Rat   316 KRGSSLAGAGAAEGPAGGFMVVAGGSSSGNCGEVAPGLTLGT--AGTAHLYQGLGPVVL------ 372

  Fly   634 SQQNSSPELHDMSTTGQAGGQRVVSISLNATAP-PTPDGT 672
                |.|..|.||..|...|....|.   .|.| ||...|
  Rat   373 ----SGPVSHLMSFPGPLLGSPTASF---PTGPVPTTTST 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 GAT1 <533..644 CDD:227928 52/138 (38%)
ZnF_GATA 538..589 CDD:238123 36/50 (72%)
Gata1NP_036896.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 109..128 5/40 (13%)
Interaction with MED1 and CCAR1. /evidence=ECO:0000250|UniProtKB:P15976 200..330 56/135 (41%)
ZnF_GATA 203..249 CDD:238123 13/50 (26%)
Required for interaction with ZFPM1. /evidence=ECO:0000250 203..222 5/18 (28%)
Interaction with CALCOCO1. /evidence=ECO:0000250|UniProtKB:P15976 249..315 41/66 (62%)
ZnF_GATA <268..308 CDD:238123 29/39 (74%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..325 10/27 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 392..413 6/17 (35%)

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