DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and Gata2

DIOPT Version :9

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_254277.1 Gene:Gata2 / 25159 RGDID:2664 Length:480 Species:Rattus norvegicus


Alignment Length:422 Identity:126/422 - (29%)
Similarity:170/422 - (40%) Gaps:128/422 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   282 HHQ------------HQAAAAASAAAQTVH--IATSSHGGTVRFVTEDVRFTTAGPETSASNMYY 332
            ||.            |.:||.|.....:|:  .|..|.||:                        
  Rat   112 HHSPWTVSPFSKTPLHPSAAGAPGGPLSVYPGAAGGSGGGS------------------------ 152

  Fly   333 DVPVVDGSVHANESKTYADLGNAYAPFPPSSSFSSNSYAATLQQGNTIYSVPGTGQFLAKSESGL 397
                  ||..|:.:.|.|..|:....|||:.....:...:|  .|....:.|..|..:|:.|   
  Rat   153 ------GSSVASLTPTAAHSGSHLFGFPPTPPKEVSPDPST--TGAASPASPSAGGSVARGE--- 206

  Fly   398 NQTGLLRQTGPATFQTISFEGGN----GIEPLWASPAP----PEYQSVQFSNFHPQVIDEYGSGN 454
            ::.|:..|.  :..:::..|||:    |:.|:...||.    |.|.|     :.|....|||||.
  Rat   207 DKDGVKYQV--SLSESMKMEGGSPLRPGLAPMGTQPATHHPIPTYPS-----YVPASAHEYGSGL 264

  Fly   455 MSTSHW--PPASSIGQYDGSLVTASSTSSPNHELKCENCHG---PFLRKG--SEYFCPNCPAFMR 512
            .....:  .||||......|...:.|...     :|.||..   |..|:.  ..|.|..|..:.:
  Rat   265 FHPGGFLGGPASSFTPKQRSKARSCSEGR-----ECVNCGATATPLWRRDGTGHYLCNACGLYHK 324

  Fly   513 M----APRITQRQAKPK--AAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHN 571
            |    .|.|     |||  .:||   ||.|..||||||.:|||||||..|:||||||||||||||
  Rat   325 MNGQNRPLI-----KPKRRLSAA---RRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHN 381

  Fly   572 MNRPLSMKKEGIQKRKRK-----PKNNGGAPM----------------------HRAP---LPSM 606
            :||||:|||||||.|.||     .|:..||..                      |.||   ||..
  Rat   382 VNRPLTMKKEGIQTRNRKMSSKSKKSKKGAECFEELSKCMQEKSSPFSAAALAGHMAPVGHLPPF 446

  Fly   607 SQGVNLMAN-SPLYPSQV-------PVSMLNS 630
            |...:::.. :|::||..       |.||:.:
  Rat   447 SHSGHILPTPTPIHPSSSLSFGHPHPSSMVTA 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 38/48 (79%)
ZnF_GATA 538..589 CDD:238123 40/50 (80%)
Gata2NP_254277.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..208 10/46 (22%)
ZnF_GATA 294..344 CDD:238123 16/57 (28%)
ZnF_GATA 349..398 CDD:238123 40/48 (83%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 457..480 6/22 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10071
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.910

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