Protein Alignment GATAe and med-1

DIOPT Version :10

• Sequence 1: NP_650516.2
• Gene: GATAe / 41945
• FlyBaseID: FBgn0038391
• Length: 746
• Species: Drosophila melanogaster
• Sequence 2: NP_001366746.1
• Gene: med-1 / 191705
• WormBaseID: WBGene00003180
• Length: 174
• Species: Caenorhabditis elegans
• Alignment Length: 246
• Identity: 59/246 - (23%)
• Similarity: 89/246 - (36%)
• Gaps: 82/246 - (33%)

  Fly   355 AYAPFPPSSSFSSNSYAATLQQ-GNTIYSVPGTGQFLAKSESGLNQTGLLRQTGPATFQTISFEG 418
            || |:|..:  :.|.:..|.|| |...||.|..|.:                    :|.|
 Worm     2 AY-PYPVFN--AENVFDNTQQQVGFYDYSTPFNGTY--------------------SFTT----- 38

  Fly   419 GNGIEPLWASPAPPEYQSVQFSNFHPQVIDEYGSGNMSTSHWPPASSIGQYDGSLVTASSTSSPN 483
                          :|.  .::|::..|       |...|::|.|..    ..||..:|:|.|||
 Worm    39 --------------DYS--YYNNYYDYV-------NTYASYYPTAMD----SSSLNISSTTGSPN 76

  Fly   484 HELKCENCHGPFLRKGSEYFCPNCPAFMRMAPRITQRQAKPKAAAAPNNRRN--GVTCANCQTNS 546
                            |.:|    ..|...:...|......:::..|:|..|  ...|:||....
 Worm    77 ----------------SSHF----TTFTHFSTPSTSPSTSTQSSTTPSNSDNKKSFQCSNCSVTE 121

  Fly   547 TTLWR--RNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKNNGG 595
            |..||  |:.||.. ||||.:|.:.:|..||::...: .||||.|.:...|
 Worm   122 TIRWRNIRSKEGIQ-CNACFIYQRKYNKTRPVTAVNK-YQKRKLKVQETNG 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GATAe	NP_650516.2	GAT1	<533..644	CDD:227928	24/67 (36%)
		ZnF_GATA	538..589	CDD:238123	21/52 (40%)
med-1	NP_001366746.1	ZnF_GATA	109..160	CDD:214648	17/52 (33%)