DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and end-3

DIOPT Version :10

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_506480.1 Gene:end-3 / 191631 WormBaseID:WBGene00001311 Length:242 Species:Caenorhabditis elegans


Alignment Length:264 Identity:54/264 - (20%)
Similarity:89/264 - (33%) Gaps:76/264 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   367 SNSYAATLQQGNTIYSVP-GTGQFLAKSESGLNQTGLLRQTGPATFQTISFEGGNGIEPLWASPA 430
            |||::::....|:..|.. |..||  ..:...|:.|                        :.:|:
 Worm     3 SNSFSSSSSSSNSPMSFDFGFPQF--PEQVQFNEEG------------------------YGTPS 41

  Fly   431 PPEYQSVQFSNFHPQ--VIDEYGSG---NMSTSHWPPASSIGQYDGSLV---------------- 474
            |...|::.:.::..|  ..:.|..|   :|..:...|.:..|.|:.:..                
 Worm    42 PDVLQNMNYHHYPAQDMTTNSYNGGYDNSMQQNFMQPDNGAGYYNENYQQMPDFQFPVQNFDFTN 106

  Fly   475 ----------TASSTSSPNHELKCENCHGPFLRKGSEYFCPNCP--AFMRMAPRITQRQAKPKAA 527
                      ...|.:|.||.....|          |...|..|  ......|....::.||...
 Worm   107 QFEFTTPINDLQQSQTSINHTNPDNN----------ENSMPEIPIDGGFNFFPAQEVQEWKPARK 161

  Fly   528 AAPNNRRN------GVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKR 586
            |:.|..:.      ..:|:||....|.|||||.:|...||.|.||.::....||..:..:...||
 Worm   162 ASKNKIKKISTMHINSSCSNCGCRETKLWRRNEQGETECNPCNLYERVKGHKRPQHLWNKPAAKR 226

  Fly   587 KRKP 590
            :|:|
 Worm   227 RRRP 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 GAT1 <533..644 CDD:227928 21/64 (33%)
ZnF_GATA 538..589 CDD:238123 19/50 (38%)
end-3NP_506480.1 ZnF_GATA 178..229 CDD:238123 19/50 (38%)

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