DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and elt-3

DIOPT Version :9

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001367208.1 Gene:elt-3 / 181503 WormBaseID:WBGene00001251 Length:317 Species:Caenorhabditis elegans


Alignment Length:304 Identity:78/304 - (25%)
Similarity:118/304 - (38%) Gaps:70/304 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   351 DLGNAYAPFPPSSSFSS--------NSYAATLQQGNTIYSV-----PGTGQFLAK-----SESGL 397
            :..|.|.|.||.||.||        |:...|......:.|:     ..|.|::..     .|...
 Worm     2 ETANYYLPSPPYSSTSSSDSRESRMNTPIPTTYSEENVNSLFHLMPDNTDQWMTSQKNFWQEGSP 66

  Fly   398 NQTGLLRQTGPATFQTISFEGGN--------GIEP--LWASPAPPEYQSVQFSNFHPQVIDEY-- 450
            :.:..|.|......|.....|.:        .::|  .:.||...:|:..:.:|   .::|.|  
 Worm    67 SSSEYLHQQAVQPSQQARLPGISNFMKDSQLSVKPAAYYCSPTMNDYRVEKVAN---TLLDPYVQ 128

  Fly   451 ----------------GSGNMSTSHWPPASSIGQYDGSLVTASSTSSPN-HELKCEN-------C 491
                            ....|...::|...|....:.:.||.:.....| .||...|       |
 Worm   129 LDQPTYADFTNAQVLNHQQEMLQMNFPTPLSTSYMNTAQVTQTHQMPFNIFELNLSNFATFQPAC 193

  Fly   492 HGPFLRKGSEYFCPNCPAFMRMA--------PRITQRQAKPKAAAAPNNRRNGVTCANCQTNSTT 548
            ..|.....|.   |..| :..|:        |.:.:.:...|..||....:|.: |:||:|..||
 Worm   194 DTPLPLLNSS---PTHP-YTTMSNFTPPPQDPLVAEPKPMKKRMAAVQCHQNSI-CSNCKTRETT 253

  Fly   549 LWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRKPKN 592
            |||||.||...||||.||::.:|..||||::|:||.||.|:|:|
 Worm   254 LWRRNGEGGVECNACNLYFRKNNRKRPLSLRKDGIMKRNRRPRN 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 26/48 (54%)
ZnF_GATA 538..589 CDD:238123 29/50 (58%)
elt-3NP_001367208.1 ZnF_GATA 243..294 CDD:238123 29/51 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10071
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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