DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and elt-2

DIOPT Version :9

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_509755.2 Gene:elt-2 / 181250 WormBaseID:WBGene00001250 Length:433 Species:Caenorhabditis elegans


Alignment Length:430 Identity:106/430 - (24%)
Similarity:162/430 - (37%) Gaps:143/430 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 YADLGNAYAPFPPSSSFS----------------------------SNSYAATLQQGNTIYSVPG 385
            |.|..|.:|...||....                            .|.||:.:::.:.|.|  |
 Worm     5 YNDNVNGWAEMEPSQPMGGLRLPTQNMDPPEQNNESQLSELPRMKIDNDYASPIERQSVITS--G 67

  Fly   386 TGQFLAKSE-------SGLNQT--GLLRQTGPATFQTISFEGGNGIEPLWASPAPPEYQSV---- 437
            |..:..|.|       :|::.:  |:|.||   |.|                |..|.|..:    
 Worm    68 TNNYEPKVETVTSFFHTGIDYSNFGMLDQT---TMQ----------------PFYPLYSGIPVNT 113

  Fly   438 --QFSNFHPQVIDEYGSGNMSTSHWPPASSIGQYDGSLVTAS-----STSSPNHE-LKC-ENCHG 493
              .||.:...:.|:            |:    .||.|:.|.:     .|.:|.:| :|| ::|..
 Worm   114 LGTFSGYTNSIYDK------------PS----LYDPSIPTINIPSTYPTVAPTYECVKCSQSCGA 162

  Fly   494 PFLRKGSEYFCPNC-------------------PAFMRM-----APRITQRQAKPKAAA-----A 529
            ..........|.||                   |..:.:     ..:|.::.:|..:::     .
 Worm   163 GMKAVNGGMMCVNCSTPKTTYSPPVAYSTSLGQPPILEIPSEQPTAKIAKQSSKKSSSSNRGSNG 227

  Fly   530 PNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEG-IQKRKRKPKNN 593
            ..:||.|:.|:||...:|||||||.||:|||||||||:|||::.||.|||||| :|.||||.|:.
 Worm   228 SASRRQGLVCSNCNGTNTTLWRRNAEGDPVCNACGLYFKLHHIPRPTSMKKEGALQTRKRKSKSG 292

  Fly   594 GGAPMHRAPLPSMSQGVNLMANSPLYPSQVPVSMLNSQLNSQQNSSPELHDMSTTGQAGGQRVVS 658
            ..:      .||.|:.           .:......:|.....|.||..     ..|.|...|.:|
 Worm   293 DSS------TPSTSRA-----------RERKFERASSSTEKAQRSSNR-----RAGSAKADRELS 335

  Fly   659 ISLNATAPPTPDGTLNM----SARHHVTGESHSPYSQQST 694
            .:..|.|..|.....::    ||...:..:::|.|.|.:|
 Worm   336 TAAVAAATATYVSHADLYPVSSAAVTLPDQTYSNYYQWNT 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 34/49 (69%)
ZnF_GATA 538..589 CDD:238123 35/51 (69%)
elt-2NP_509755.2 ZnF_GATA 232..280 CDD:214648 32/47 (68%)
ZnF_GATA 236..288 CDD:238123 35/51 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156190
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2600
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.650

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