DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and end-1

DIOPT Version :9

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_506475.1 Gene:end-1 / 179893 WormBaseID:WBGene00001310 Length:221 Species:Caenorhabditis elegans


Alignment Length:241 Identity:58/241 - (24%)
Similarity:96/241 - (39%) Gaps:50/241 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   401 GLLRQTGPATFQTISFEGGNGIEPLWASPAPPEYQSVQFSNFHPQVIDEYGSGNMSTSHWPPASS 465
            |::.:.|......:.|...:|      :|:|     :..:..:.|...:||.|:..      ...
 Worm    18 GVIDKDGNVHSHEMHFPDNHG------NPSP-----LDATQMYQQAPVQYGGGDQY------FDD 65

  Fly   466 IGQYDGSLVTASSTSSPNH----ELKCENCHG-PFLRKGSEY---FCPNCPAFMRMAPRITQRQA 522
            .|||.......:..|:|.|    .|...||:. .:.:.|.:|   ...|.|      |..|.|:.
 Worm    66 FGQYFVQSYDPAQQSTPVHPMFGSLDMMNCYSQQYPQIGQDYQQQEIENIP------PVSTNRKI 124

  Fly   523 KPKAAAAPNNRRNGVTCA--NCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQK 585
            ..|   .|:.......|:  ||:|..||||||.:.|...||.|.||::.:.:.||..:.::.|.|
 Worm   125 VNK---KPSTFHTNSVCSNPNCRTRETTLWRRTDSGAIECNGCSLYFRKNGIQRPAELCRKTIMK 186

  Fly   586 RKRKPKNNGGAPMHRAPLPSMSQGVNLMANSPLYPSQVPVSMLNSQ 631
            |.|:|:..     .::|.|.         :|.|..:..|:..:.||
 Worm   187 RNRRPRAE-----VQSPTPE---------DSKLCHNTTPLQNIPSQ 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 18/50 (36%)
ZnF_GATA 538..589 CDD:238123 21/52 (40%)
end-1NP_506475.1 GAT1 <80..>221 CDD:227928 45/162 (28%)
ZnF_GATA 137..190 CDD:238123 21/52 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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