DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and elt-6

DIOPT Version :9

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_500144.2 Gene:elt-6 / 176993 WormBaseID:WBGene00001253 Length:367 Species:Caenorhabditis elegans


Alignment Length:615 Identity:119/615 - (19%)
Similarity:176/615 - (28%) Gaps:314/615 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 EQQEQQQQHQQQAATSVGVVVQTGQAGVSEPEEQYVVVPRNQRRILTTAGTLE------------ 129
            |.:|:.:...::.||:....  ||.|.:.:...|  .|.:...:|....|.||            
 Worm    16 EVEEEMEDRVEETATTAAAC--TGCAQLHKDIRQ--DVSKMMSKIDEVCGRLEALISEKEKVLLE 76

  Fly   130 -LNEAREGE---PSTNASNASSGSASDS----------------HIEYQRSAHQSPGATHYVQMA 174
             ::|:...|   ||...|.||..|...|                |:|       :.|:....:..
 Worm    77 QMSESGSEEKYPPSPTESRASPSSVGKSNGGCRKRKPTKESVNRHLE-------NGGSDSPFEKI 134

  Fly   175 PRNAEVTEQVGAAAGAPP-----GTIFAYPIICNGDDVAAIKIETLEKGEATGESQQQQQQL--- 231
            .||  ::..|.|::..|.     |.:|        |.:|               :.|....|   
 Worm   135 TRN--ISTPVSASSPFPDFQNFNGFVF--------DPMA---------------NPQNMMNLLNL 174

  Fly   232 -QQHQHQQQQQCPTPNGASYGETIVISSEAEALQHHHQQQQQHQQQQHQQQHHQHQAAAAASAAA 295
             ||.|||                        |..|||.|||..:|:..:.:..:.|         
 Worm   175 VQQQQHQ------------------------AAAHHHAQQQAREQKPVKAEESKQQ--------- 206

  Fly   296 QTVHIATSSHGGTVRFVTEDVRFTTAGPETSASNMYYDVPVVDGSVHANESKTYADLGNAYAPFP 360
                                                      :.|.:.|:|              
 Worm   207 ------------------------------------------EPSENRNQS-------------- 215

  Fly   361 PSSSFSSNSYAATLQQGNTIYSVPGTGQFLAKSESGLNQTGLLRQTGPATFQTISFEGGNGIEPL 425
            ||:|                                :.|| ||.|.      ::.|.|       
 Worm   216 PSAS--------------------------------VEQT-LLDQL------SMQFNG------- 234

  Fly   426 WASPAPPEYQSVQFSNFHPQVIDEYGSGNMSTSHWPPASSIGQYDGSLVTASSTSSPNHELKCEN 490
             .||:|                         |.|...|::.|..:......||.|.         
 Worm   235 -KSPSP-------------------------TVHASTAAAAGSSEDDTSANSSISK--------- 264

  Fly   491 CHGPFLRKGSEYFCPNCPAFMRMAPRITQRQAKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNE 555
                                                            |:||.|..||.|||:.|
 Worm   265 ------------------------------------------------CSNCSTIKTTAWRRDLE 281

  Fly   556 GNPVCNACGLYYKLHNMNRPLSMKKEGIQKRKRK-------PKNNGGAPMHR-APLPSMSQGVNL 612
            |..|||||||||:||..:||:.|:|:.||:|.|:       |..:..|...: ..||||:.|   
 Worm   282 GKLVCNACGLYYRLHRTHRPVHMRKDFIQQRFRRRMREDENPATSQAAVFSQLLGLPSMANG--- 343

  Fly   613 MANSPLYPSQVPVSMLNSQLN--SQQNSSP 640
            .||:..:..|:      :|||  .:|..||
 Worm   344 GANALTFLEQI------NQLNQSQEQRKSP 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 26/48 (54%)
ZnF_GATA 538..589 CDD:238123 29/50 (58%)
elt-6NP_500144.2 GAT1 <254..>367 CDD:227928 47/178 (26%)
ZnF_GATA 264..315 CDD:238123 29/107 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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