DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and Gata6

DIOPT Version :9

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_017173323.1 Gene:Gata6 / 14465 MGIID:107516 Length:590 Species:Mus musculus


Alignment Length:611 Identity:158/611 - (25%)
Similarity:219/611 - (35%) Gaps:167/611 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 EPSTNASNASSGSASDSHIEYQRSAHQSP-GATHYVQMAPRNAEVTEQVGAAAGAPPG-----TI 195
            |||:..|..||.|:|.|     |...:.| ||:        |....:....|...|||     :.
Mouse    31 EPSSPLSPISSSSSSCS-----RGGDRGPCGAS--------NCRTPQLDAEAVAGPPGRSLLLSP 82

  Fly   196 FAYPIICNGDDVAAIKIETLEKGEATGESQQQQQQLQQHQHQQQQQCPTPNGASYGETIVISSEA 260
            :|..........||..:.......:|.|.......|.|              |:....::.||..
Mouse    83 YASHPFAAAHGAAAPGVAGPGSALSTWEDLLLFTDLDQ--------------AATASKLLWSSRG 133

  Fly   261 EALQHHHQQQQQHQQQQHQQQHHQ-------------HQAAAAASAAA---QTVHIAT------- 302
            ..|.....:|.:...|.......|             |.|||||:|||   ..|::.|       
Mouse   134 AKLSPFAAEQPEEMYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAAAAAASSPVYVPTTRVGSML 198

  Fly   303 -------------SSHGGTVRFVTEDVRFTTAGPETSASNMYYDVPVVDGS----------VHAN 344
                         |:|.|            .||.....|....|.|...|.          ..|.
Mouse   199 SGLPYLQGAGSGPSNHAG------------GAGAHPGWSQASADSPPYGGGGAAGGGAAGPGGAG 251

  Fly   345 ESKTYADLGNAYAPFPPSSSFSSNSYAATLQQGNT-IYSVPGTGQFLAKSESGLNQTGLLRQTGP 408
            .:..:|.....|:|.||.::.::......:..|.| ..||.|.|..||......:|...|....|
Mouse   252 SATAHASARFPYSPSPPMANGAARDPGGYVAAGGTGAGSVSGGGGSLAAMGGREHQYSSLSAARP 316

  Fly   409 ATFQTISFEGGNG-----------IEPLWASPAPPEYQSVQFSNFHPQVIDEYGSGNMSTSHWPP 462
            .          ||           ..|..|:|..|.:.:..|..                   |.
Mouse   317 L----------NGTYHHHHHHHPTYSPYMAAPLTPAWPAGPFET-------------------PV 352

  Fly   463 ASSI-GQYDGSLVTASSTSSP-----NHELKCENC---HGPFLRKG--SEYFCPNCPAFMRMAPR 516
            ..|: |:....|......|:.     :...:|.||   ..|..|:.  ..|.|..|..:.:| ..
Mouse   353 LHSLQGRAGAPLPVPRGPSTDLLEDLSESRECVNCGSIQTPLWRRDGTGHYLCNACGLYSKM-NG 416

  Fly   517 ITQRQAKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKE 581
            :::...||: ...|::||.|::||||.|.:|||||||.||.|||||||||.|||.:.|||:||||
Mouse   417 LSRPLIKPQ-KRVPSSRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKE 480

  Fly   582 GIQKRKRKPKNNGGAPMHRAPLPSMSQGVNLMANSPLYPSQVPVSMLNSQLNSQ---QNSSPELH 643
            |||.|||||||             :::......||   ...||::..:|..||.   :|:||.. 
Mouse   481 GIQTRKRKPKN-------------INKSKACSGNS---SGSVPMTPTSSSSNSDDCTKNTSPST- 528

  Fly   644 DMSTTGQAGGQRVVSIS--LNATAPP 667
            ..:|:|:.|...|.|.|  |:..|.|
Mouse   529 QATTSGKPGDSFVESASQYLDPLAHP 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 35/48 (73%)
ZnF_GATA 538..589 CDD:238123 38/50 (76%)
Gata6XP_017173323.1 GATA-N 147..371 CDD:368398 50/264 (19%)
ZnF_GATA 383..428 CDD:238123 11/46 (24%)
ZnF_GATA 437..488 CDD:238123 38/50 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I11848
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
54.860

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