DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and Gata3

DIOPT Version :9

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_032117.1 Gene:Gata3 / 14462 MGIID:95663 Length:443 Species:Mus musculus


Alignment Length:520 Identity:139/520 - (26%)
Similarity:195/520 - (37%) Gaps:166/520 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 VISSEAEALQHHHQQ--QQQHQQQQHQQQHHQHQAA---------AAASAAAQTVHIATSSHGGT 308
            |.:.:...:.|||..  ..||....|....|.:..|         ...:...|..|: .|.:|.:
Mouse     3 VTADQPRWVSHHHPAVLNGQHPDTHHPGLGHSYMEAQYPLTEEVDVLFNIDGQGNHV-PSYYGNS 66

  Fly   309 VRFVTEDVRFTTAGPETSASNMYYDVPVVDGSVHANESKTYADLGNAYAPFPPSSSFSSNSYAAT 373
            ||...:  |:    |.|...:.....|::.||:      .:.|.|.|.:....:|.::.:.::.|
Mouse    67 VRATVQ--RY----PPTHHGSQVCRPPLLHGSL------PWLDGGKALSSHHTASPWNLSPFSKT 119

  Fly   374 -LQQGN----TIYSVPGTGQFLAKSESGLNQTGLLRQTGPATFQTISFEGGNGIEPLWASPAPP- 432
             :..|:    ::|. |.:...||...|..:..     |.|.|            .|...||.|. 
Mouse   120 SIHHGSPGPLSVYP-PASSSSLAAGHSSPHLF-----TFPPT------------PPKDVSPDPSL 166

  Fly   433 -----------------EYQ-----SVQFSNFH----------------------PQVIDEYGSG 453
                             :||     |::....|                      |..:.||.||
Mouse   167 STPGSAGSARQDEKECLKYQVQLPDSMKLETSHSRGSMTTLGGASSSAHHPITTYPPYVPEYSSG 231

  Fly   454 NMSTSHWPPASSIGQYDGSLVTASSTSSP-----NHELKCENCHG---PFLRKG--SEYFCPNCP 508
                 .:||:|.:|   ||.......|.|     ....:|.||..   |..|:.  ..|.|..|.
Mouse   232 -----LFPPSSLLG---GSPTGFGCKSRPKARSSTEGRECVNCGATSTPLWRRDGTGHYLCNACG 288

  Fly   509 AFMRM----APRITQRQAKPK--AAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYY 567
            .:.:|    .|.|     |||  .:||   ||.|.:||||||.:|||||||..|:||||||||||
Mouse   289 LYHKMNGQNRPLI-----KPKRRLSAA---RRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYY 345

  Fly   568 KLHNMNRPLSMKKEGIQKRKRK--PKNNGGAPMHRAPLPSMSQGVNLMANSPLYPSQVPVSMLNS 630
            ||||:||||:|||||||.|.||  .|:.....:|.|           :.:.|...|..|.: |:.
Mouse   346 KLHNINRPLTMKKEGIQTRNRKMSSKSKKCKKVHDA-----------LEDFPKSSSFNPAA-LSR 398

  Fly   631 QLNSQQNSSPELHD--MSTTGQAGGQRVVSISLNATAPPTPDGTLNMSARHHVTGESHSPYSQQS 693
            .::|..:.||..|.  |.||                  |||        .|..:|.|..|:...|
Mouse   399 HMSSLSHISPFSHSSHMLTT------------------PTP--------MHPPSGLSFGPHHPSS 437

  Fly   694  693
            Mouse   438  437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 38/48 (79%)
ZnF_GATA 538..589 CDD:238123 40/50 (80%)
Gata3NP_032117.1 Interaction with TBX21. /evidence=ECO:0000269|PubMed:15662016 1..257 56/292 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 6/24 (25%)
PHA03377 <76..260 CDD:177614 39/215 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..180 8/53 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..214 1/20 (5%)
ZnF_GATA 262..312 CDD:238123 16/57 (28%)
Flexible linker. /evidence=ECO:0000250 288..316 11/35 (31%)
ZnF_GATA 316..366 CDD:238123 40/49 (82%)
YxKxHxxxRP 344..353 7/8 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 412..443 11/52 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10071
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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