DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and trps1

DIOPT Version :9

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_004915118.1 Gene:trps1 / 100493561 XenbaseID:XB-GENE-1013667 Length:1270 Species:Xenopus tropicalis


Alignment Length:609 Identity:139/609 - (22%)
Similarity:211/609 - (34%) Gaps:187/609 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 YPIICNGDDVA--AIKIETLEKGEATGESQQQQQQLQQHQHQQQQQCPTPNGASYGETIVISSEA 260
            ||..|...:.:  |:.:..|..| .||.::.:         .|..||      |:.     |.:.
 Frog   572 YPFACKKSNCSHCALLLLHLSAG-VTGSTRVK---------HQCDQC------SFS-----SPDV 615

  Fly   261 EALQHHHQQQQQHQQ-QQHQQQHHQHQAAAAASAAAQTVHIAT------------SSHGGTVR-- 310
            :.|..|::...:.|. :..|:.:|||.|....|......|..|            |.|...|.  
 Frog   616 DVLLLHYENAHEAQACEVKQELNHQHGADGQPSIKESKEHSCTKCDFIVQVEEDLSRHYRRVHNC 680

  Fly   311 FVTEDVRFTTAGPET------SASNMYYDVPVVDGSVH------ANESKTYADLGNAYAPFPPSS 363
            :......||.|..::      ||.....::...:|..|      ..|.||...:.|..||     
 Frog   681 YKCRQCNFTAADTQSLLDHFNSAHCQESEITTSNGGEHHGASSIKEEPKTDLKVYNLVAP----- 740

  Fly   364 SFSSNSYAATLQQGNTIYSVPGTGQFLAKSESGLNQTGLLRQTGPATFQTISFEGGNGIEPLWAS 428
                     ..:.|..|:......:.|...|:       ||                  |..|:.
 Frog   741 ---------DSKMGEAIFDSTVKKEKLEDKET-------LR------------------EKSWSD 771

  Fly   429 PAPPEYQSVQFSNFHPQVIDEYGSGNMSTSHWPPASSIGQYDGSLVTA--------SSTSSPNHE 485
            .|..:.:.|.:.  .|.:        :.||  |..|.:|.  |.|.|.        ||..|||.|
 Frog   772 SAVDDLRGVAWR--APDI--------LRTS--PSYSQMGL--GLLTTVSVNQEQQKSSRDSPNVE 822

  Fly   486 ------------LKCENCHGPFLRKGSEYFCPNCPAFMRMAPRITQRQAKPKAAAAPNNRR-NGV 537
                        ::.:...|.......|....:.|.:    |.....::|.::.:....|| :||
 Frog   823 AAHLARPLYGLSIESKGFQGVTAGASGEKSGQHTPQY----PTAGDGKSKDESQSLLRRRRGSGV 883

  Fly   538 TCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEG-----IQKRKRKPKNNGGAP 597
            .||||.|..|:|||:|..|..||||||||.|||:..|||::.|:.     |::|.||..|     
 Frog   884 FCANCLTTKTSLWRKNANGGYVCNACGLYQKLHSTPRPLNIIKQNNGEQIIRRRTRKRLN----- 943

  Fly   598 MHRAPLPSMSQGVNLMANSPLYPSQVPVSMLNSQLNSQQNSSPELHDMSTTGQAGG----QRVVS 658
                                      |.::...|||..|..|.|       .||.|    :|...
 Frog   944 --------------------------PEALQPEQLNKHQRPSSE-------EQANGSPLERRSED 975

  Fly   659 ISLNATAPPTPDGTLNMSARHHVTGESHSPYSQQSTPQSQSPHLPGTVPINRQIVQPVP-TIESS 722
            .|:..........::|.........:|||  :||:...||      |:.|::: :||:. .|:|.
 Frog   976 HSMEGHQRENQQLSMNKYESQASLTKSHS--AQQTMIVSQ------TMDIHKR-MQPLHIQIKSP 1031

  Fly   723 RSSNTE--LTPSVITRTGLPERSS 744
            :.|:.|  .:.||....|..||.|
 Frog  1032 QESSGEPGNSSSVSDGKGSSERGS 1055

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 29/54 (54%)
ZnF_GATA 538..589 CDD:238123 28/55 (51%)
trps1XP_004915118.1 ZnF_GATA 884..940 CDD:238123 28/55 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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