DRSC/TRiP Functional Genomics Resources

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Protein Alignment GATAe and gata2

DIOPT Version :9

Sequence 1:NP_650516.2 Gene:GATAe / 41945 FlyBaseID:FBgn0038391 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_004914149.2 Gene:gata2 / 100487142 XenbaseID:XB-GENE-478165 Length:462 Species:Xenopus tropicalis


Alignment Length:392 Identity:125/392 - (31%)
Similarity:158/392 - (40%) Gaps:109/392 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 HQHQAAAAASAAAQTVHIATSSHGGTVRFVTEDVRFTTAGPETSASNMYYDVPVVDGSVHANESK 347
            |.|.....:..|...:|.|.:  ||::...|.    ::.||.:..|      |.:.|........
 Frog   109 HHHNPWTVSPFAKTPLHPAAA--GGSLYPGTG----SSGGPSSHTS------PHLFGFPPTPPKD 161

  Fly   348 TYADLGNAYAPFPPSSS----FSSNSYAATLQQGNTIYSVPGTGQFLAKSESGLNQTGLLRQTG- 407
            ...|.|.|.:  |||||    ..|..|..:|.:|             .|.|.|......|.|.| 
 Frog   162 VSPDPGTAAS--PPSSSRLEDKDSIKYQVSLSEG-------------MKMEGGSPLRNSLAQMGT 211

  Fly   408 PATFQTISFEGGNGIEPLWAS--PAPPEYQSVQFSNFHPQVIDEYGS--GNMSTSHWPPASSIGQ 468
            .:|...|         |.:.|  |||.:|.|   ..|||      ||  |..::|..|...|..:
 Frog   212 QSTHHPI---------PTYPSYVPAPHDYSS---GLFHP------GSLLGGPASSFTPKQRSKSR 258

  Fly   469 YDGSLVTASSTSSPNH--ELKCENCHG---PFLRKG--SEYFCPNCPAFMRM----APRITQRQA 522
               |....:..||..|  ..:|.||..   |..|:.  ..|.|..|..:.:|    .|.|     
 Frog   259 ---SCSERNPVSSSFHLEGRECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLI----- 315

  Fly   523 KPK--AAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYYKLHNMNRPLSMKKEGIQK 585
            |||  .:||   ||.|..||||||.:|||||||..|:||||||||||||||:||||:|||||||.
 Frog   316 KPKRRLSAA---RRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKKEGIQT 377

  Fly   586 RKRK-----PKNNGGA----------------------PMHRAPL----PSMSQGVNLMANSPLY 619
            |.||     .||..|:                      ..|..|:    |....|..|...:|::
 Frog   378 RNRKMSNKSKKNKKGSECFEELSKCMQEKSSPFSAAALASHMGPMGHLGPFTHSGHILQTPTPIH 442

  Fly   620 PS 621
            ||
 Frog   443 PS 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GATAeNP_650516.2 ZnF_GATA 534..583 CDD:214648 38/48 (79%)
ZnF_GATA 538..589 CDD:238123 40/50 (80%)
gata2XP_004914149.2 ZnF_GATA 276..326 CDD:238123 16/57 (28%)
ZnF_GATA 331..380 CDD:238123 40/48 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10071
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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