Protein Alignment srp and ZML2

DIOPT Version :10

• Sequence 1: NP_732100.2
• Gene: srp / 41944
• FlyBaseID: FBgn0003507
• Length: 1264
• Species: Drosophila melanogaster
• Sequence 2: NP_564593.1
• Gene: ZML2 / 841585
• AraportID: AT1G51600
• Length: 302
• Species: Arabidopsis thaliana
• Alignment Length: 393
• Identity: 81/393 - (20%)
• Similarity: 120/393 - (30%)
• Gaps: 139/393 - (35%)

  Fly   534 HQQQQQQHQQHQQQQLQQQQQQHHHNQHQHHNSSSSSPGPAGLHHSSSSAATAAAVAAATAAVNG 598
            |....:.|.:..|..:..|.:  ||..|..||.|......|.                     :|
plant     5 HGSNARMHIREAQDPMHVQFE--HHALHHIHNGSGMVDDQAD---------------------DG 46

  Fly   599 HNSSLEDGYGSPRSSHSGGGGGGTLPAFQRIAYPNSGSVERYAPITNYRG--------QNDTWFD 655
            :...:.:|..:...||.|.                         :|:.||        |.|
plant    47 NAGGMSEGVETDIPSHPGN-------------------------VTDNRGEVVDRGSEQGD---- 82

  Fly   656 PLSYATSSSGQAQLGVGVGAGVVSNV--IRNGRAISAANAAAAAAADGTTGRVD--PGT--FLSA 714
              ....|..||..:...|....|..|  :..||.:..| |.....:.....||.  |||  ..|.
plant    83 --QLTLSFQGQVYVFDSVLPEKVQAVLLLLGGRELPQA-APPGLGSPHQNNRVSSLPGTPQRFSI 144

  Fly   715 SASLSAMA----AESGGDFYKPNSF------------NVGGGGRSKANTSGAASSYSCPGSNATS 763
            ...|:::.    ...|.:|.|...:            |.|....:|:|...|||:.|..|||.|.
plant   145 PQRLASLVRFREKRKGRNFDKKIRYTVRKEVALRMQRNKGQFTSAKSNNDEAASAGSSWGSNQTW 209

  Fly   764 AATSAVASGTAATAATTLDEHVSRANSRRLSASKRAGLSCSNC--HTTHTSLWRRNPAG-EPVCN 825
            |..|                          |.::...:||.:|  ....|.:.||.||| ..:||
plant   210 AIES--------------------------SEAQHQEISCRHCGIGEKSTPMMRRGPAGPRTLCN 248

  Fly   826 ACGLYYKLHSVPRPLTMKKDTIQKRKRKPKGTKSEKSKSKSKNALNAIM---ESGSLVTNCHNVG 887
            ||||.:                     ..||...:.||:..:.|.|..:   |..:|.|: |.:.
plant   249 ACGLMW---------------------ANKGAFRDLSKASPQTAQNLPLNKNEDANLETD-HQIM 291

  Fly   888 VVL 890
            :.:
plant   292 ITV 294

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
srp	NP_732100.2	ZnF_GATA	802..853	CDD:238123	15/53 (28%)
ZML2	NP_564593.1	TIFY	77..112	CDD:198047	8/40 (20%)
		CCT	147..190	CDD:461849	6/42 (14%)
		ZnF_GATA	222..>265	CDD:238123	17/63 (27%)