DRSC/TRiP Functional Genomics Resources

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Protein Alignment srp and ARR4

DIOPT Version :10

Sequence 1:NP_732100.2 Gene:srp / 41944 FlyBaseID:FBgn0003507 Length:1264 Species:Drosophila melanogaster
Sequence 2:NP_172517.1 Gene:ARR4 / 837587 AraportID:AT1G10470 Length:259 Species:Arabidopsis thaliana


Alignment Length:26 Identity:10/26 - (38%)
Similarity:13/26 - (50%) Gaps:1/26 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly  1161 PSPPYYLTPEEDEQPALIKMEEMDQS 1186
            ||||..::| |...|..:..|..|.|
plant   189 PSPPLTISP-ESSPPLTVSTESSDSS 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
srpNP_732100.2 ZnF_GATA 802..853 CDD:238123
ARR4NP_172517.1 REC_typeA_ARR 36..157 CDD:381119
Blue background indicates that the domain is not in the aligned region.

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