Protein Alignment srp and CO

DIOPT Version :10

• Sequence 1: NP_732100.2
• Gene: srp / 41944
• FlyBaseID: FBgn0003507
• Length: 1264
• Species: Drosophila melanogaster
• Sequence 2: NP_197088.1
• Gene: CO / 831441
• AraportID: AT5G15840
• Length: 373
• Species: Arabidopsis thaliana
• Alignment Length: 364
• Identity: 72/364 - (19%)
• Similarity: 119/364 - (32%)
• Gaps: 109/364 - (29%)

  Fly   731 KPNSFNVGGGGRSKANTSGAASSYSCPGSNATSAATSAVASGTAATAATTLDEHVSRANSRRLSA 795
            |..|.::|.|..::|.          |.....|.|.:......:|....:.|..|..|| |..|.
plant     3 KQESNDIGSGENNRAR----------PCDTCRSNACTVYCHADSAYLCMSCDAQVHSAN-RVASR 56

  Fly   796 SKRAGLSCSNCHTTHTSLWRRNPAG-------EPVCNACGLYYKLHSVPRPLTMKKDTIQKRKRK 853
            .||..: |.:|        .|.||.       ..:|.||.  .::||. .||.      ::.:|.
plant    57 HKRVRV-CESC--------ERAPAAFLCEADDASLCTACD--SEVHSA-NPLA------RRHQRV 103

  Fly   854 PKGTKSEKSKSKSKNALNAIMESGSLVTNCHNVG----------VVLDSSQMDVNDDMKPQLDLK 908
            |              .|.....|.|.:|..|:..          :|:|..:.:..|.     |.|
plant   104 P--------------ILPISGNSFSSMTTTHHQSEKTMTDPEKRLVVDQEEGEEGDK-----DAK 149

  Fly   909 PYNSYSSQPQQQLPQYQQQQQLLMADQHSSAASSPHSMGSTSLSPSAMSHQHQTHPHQQQQQQLC 973
            ...|:.. |........|...||.:|::.:......||            .::......|.||.|
plant   150 EVASWLF-PNSDKNNNNQNNGLLFSDEYLNLVDYNSSM------------DYKFTGEYSQHQQNC 201

  Fly   974 SGLDMSPNSNY---QMSPLNMQQHQQQQSCSMQHSPSTPTSIFNTPSPTHQLHNNNNNNNNSSIF 1035
            |    .|.::|   ::.||.:::                       |..||.||..|...|....
plant   202 S----VPQTSYGGDRVVPLKLEE-----------------------SRGHQCHNQQNFQFNIKYG 239

  Fly  1036 NNNNNNNSSSNENNNKLIQKYLQAQQLSSSSNSGSTSDH 1074
            ::..:.|.:.:.|:|..|.. ::...:..|:...:|:.|
plant   240 SSGTHYNDNGSINHNAYISS-METGVVPESTACVTTASH 277

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
srp	NP_732100.2	ZnF_GATA	802..853	CDD:238123	12/57 (21%)
CO	NP_197088.1	Bbox1_BBX-like	19..62	CDD:380879	12/43 (28%)
		Bbox1_BBX-like	62..105	CDD:380879	14/74 (19%)
		CCT	306..349	CDD:461849