DRSC/TRiP Functional Genomics Resources

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Protein Alignment srp and GATA14

DIOPT Version :10

Sequence 1:NP_732100.2 Gene:srp / 41944 FlyBaseID:FBgn0003507 Length:1264 Species:Drosophila melanogaster
Sequence 2:NP_190103.1 Gene:GATA14 / 823653 AraportID:AT3G45170 Length:204 Species:Arabidopsis thaliana


Alignment Length:87 Identity:28/87 - (32%)
Similarity:33/87 - (37%) Gaps:34/87 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   780 TLDEHVSR-------ANSRRLSASKRAG--------------------------LSCSNCHTTHT 811
            |.|...||       |...||.|.||:|                          .|||:|.|..|
plant    61 TNDSKPSRNFSNLPTATRGRLHAPKRSGNKRGRQKRLSFKSPSDLFDSKFGITDKSCSHCGTRKT 125

  Fly   812 SLWRRNPAGE-PVCNACGLYYK 832
            .|||..|.|. .:|||||:.|:
plant   126 PLWREGPRGAGTLCNACGMRYR 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
srpNP_732100.2 ZnF_GATA 802..853 CDD:238123 17/32 (53%)
GATA14NP_190103.1 ZnF_GATA 116..165 CDD:238123 17/32 (53%)

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