Protein Alignment srp and GATA1

DIOPT Version :10

• Sequence 1: NP_732100.2
• Gene: srp / 41944
• FlyBaseID: FBgn0003507
• Length: 1264
• Species: Drosophila melanogaster
• Sequence 2: NP_189047.1
• Gene: GATA1 / 821990
• AraportID: AT3G24050
• Length: 274
• Species: Arabidopsis thaliana
• Alignment Length: 163
• Identity: 37/163 - (22%)
• Similarity: 57/163 - (34%)
• Gaps: 66/163 - (40%)

  Fly   752 SSYSCPGSNATSAATSAVASGTAATAATTLDEHV----------SRANSRRLSASKR-------- 798
            ||:|   |..|::.:|..::|:.|.|.||....:          ::|.|:|....:|
plant   110 SSHS---STTTTSNSSGGSNGSTAVATTTTTPTIMSCCVGFKAPAKARSKRRRTGRRDLRVLWTG 171

  Fly   799 --------------------AGLSCSNCHTTHTSLWRRNPAG-EPVCNACGLYYK---------- 832
                                .|..|.:|....|..||..||| :.:|||||:.||
plant   172 NEQGGIQKKKTMTVAAAALIMGRKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRP 236

  Fly   833 ---------LHSVPRPLTMKKDTIQKRKRKPKG 856
                     |||     ...:..::.||:...|
plant   237 ANSPTFTAELHS-----NSHRKIVEMRKQYQSG 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
srp	NP_732100.2	ZnF_GATA	802..853	CDD:238123	20/70 (29%)
GATA1	NP_189047.1	ZnF_GATA	193..243	CDD:214648	16/49 (33%)