Protein Alignment srp and gata6

DIOPT Version :10

• Sequence 1: NP_732100.2
• Gene: srp / 41944
• FlyBaseID: FBgn0003507
• Length: 1264
• Species: Drosophila melanogaster
• Sequence 2: NP_571632.2
• Gene: gata6 / 58076
• ZFINID: ZDB-GENE-000622-1
• Length: 501
• Species: Danio rerio
• Alignment Length: 522
• Identity: 130/522 - (24%)
• Similarity: 183/522 - (35%)
• Gaps: 166/522 - (31%)

  Fly   566 SSSSSPG------------------PAGLH---------------------HSSSSAATAAAVAA 591
            |||||||                  ||..|                     |.:::..::..|..
Zfish    16 SSSSSPGSPAEQSYLNTDRRDRLRSPAPTHLDPVGSRRAEGRPLHSYVHFGHPNNALPSSDDVTL 80

  Fly   592 ATAAVNGHNSSLEDGYGSPRSSHSGGGGGGTLPAFQRIAYPNSGSVERY--APITNYRGQNDTWF 654
            .|....|:...:..|:  ||.:|.||........:|.:|...:.|...|  .|...|...|.|
Zfish    81 FTDLDQGNKLIISGGH--PRETHKGGLIVDPTDMYQTLAIAAAQSQAGYNDTPSAGYMHSNPT-- 141

  Fly   655 DPLSYATSSSGQ-----AQLGVGVGAGVVSNVIRNGRAISAANAAAAAAADGTTGRVDPGTFLSA 714
            .|:...||..|.     :.|..||..       :...|:|:.:..:..|.:
Zfish   142 SPVYVPTSRVGTMIPNLSYLPPGVST-------QPSHAVSSHSVWSQPAPE-------------- 185

  Fly   715 SASLSAMAAESGGDF-YKPNSFNVGGGGRSKANT----------------SGAASS----YSCPG 758
            |.|.|..:..:...| |.|:.....|..|..:.|                ||:..|    |..|.
Zfish   186 SPSYSTGSPHTSNRFHYSPSPPMNNGTSRDTSYTTPLNVNSRDQYLSRPISGSYPSPYPPYVTPQ 250

  Fly   759 SNATSAATSA----------VASGTAATA-----ATTLDEHV----------------------- 785
            .:...||..|          :.|.:|..|     ...|:|.|
Zfish   251 LSQLPAAWPAGPFENSMLHSLQSRSAPLAIRGPNGDLLEEMVESRECVNCGSMSTPLWRRDGTGH 315

  Fly   786 ---------SRAN---------SRRLSASKRAGLSCSNCHTTHTSLWRRNPAGEPVCNACGLYYK 832
                     |:.|         .:|:|:|:|.||||:||.|:.|:|||||..|||||||||||.|
Zfish   316 FLCNACGLYSKMNGLSRPLIKPQKRMSSSRRIGLSCANCQTSTTTLWRRNAEGEPVCNACGLYTK 380

  Fly   833 LHSVPRPLTMKKDTIQKRKRKPKGTKSEKSKSKSKNALNAIMESGSLVTNCHNVGVVLDSSQMDV 897
            ||.|||||.|||:.||.||||||.....|..|.|.:.......|.|           .:|.:...
Zfish   381 LHGVPRPLAMKKEGIQTRKRKPKSLSKVKGSSGSSSVPMTPTSSSS-----------SNSEECTK 434

  Fly   898 NDDMKPQLDLKPYNSYSSQPQQQLP-------QYQQQQQLLMADQHSSAASSPHSMGSTSLSPSA 955
            |.....|:.:...||.:...|..:|       ::..|:.|......:|:|....|:...|..|.|
Zfish   435 NSPSSTQVPVTSVNSSTLVGQVDVPGTTGSMVKFPGQESLYTNVGLTSSADVASSVRGDSWCPMA 499

  Fly   956 MS 957
            ::
Zfish   500 LA 501

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
srp	NP_732100.2	ZnF_GATA	802..853	CDD:238123	37/50 (74%)
gata6	NP_571632.2	GATA-N	112..285	CDD:461628	38/195 (19%)
		ZnF_GATA	296..340	CDD:238123	2/43 (5%)
		ZnF_GATA	350..401	CDD:238123	37/50 (74%)