DRSC/TRiP Functional Genomics Resources

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Protein Alignment srp and LOC4577427

DIOPT Version :10

Sequence 1:NP_732100.2 Gene:srp / 41944 FlyBaseID:FBgn0003507 Length:1264 Species:Drosophila melanogaster
Sequence 2:XP_061499905.1 Gene:LOC4577427 / 4577427 VectorBaseID:AGAMI1_004924 Length:824 Species:Anopheles gambiae


Alignment Length:1000 Identity:227/1000 - (22%)
Similarity:312/1000 - (31%) Gaps:375/1000 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 ATTTASALAATTTAG------------------ATGSNAAANETEIAIETEN---GEAATPTAAA 108
            :|...|..|:|||.|                  |...|..:::....:|..|   ||..||:   
Mosquito    24 STAVTSVSASTTTVGGAMVSGGPVAMVDPAAPSAPPLNEPSDDAATKMEATNEPKGEDQTPS--- 85

  Fly   109 TAAAANLSSLESARSQALTSVVSETARQAVTTANASATSTST----VTAATEIATATASDTAATS 169
                          |:..:||....|.|.|:.:.||.|.|..    :...:|:.|..:|....|:
Mosquito    86 --------------SEVTSSVHQPVAHQPVSVSQASHTLTDVPVDGMIVNSELHTERSSPGQQTA 136

  Fly   170 EAAIDDDPSAINTNNN-NNNSKAQNDASESVKTKVISYHQSEDQQQQQQQQAQIYEQQQQFLSQQ 233
            ..........|.|... ...::.|...:||.....:.||      .|..|.|...||        
Mosquito   137 VIINQHKQRMITTTGQIREIAEGQEPPNESSDYDAVEYH------HQAVQSAGGVEQ-------- 187

  Fly   234 LISHHQQEQHQQAQQQQHQQVVQEQHQASWLAYDLTSGSAAAAAAAAAAASHPHLFGQFSYPPSH 298
               |....:......|:|||                 |...::||.|..||              
Mosquito   188 ---HGYSYEPTHTTSQEHQQ-----------------GVVVSSAATAVQAS-------------- 218

  Fly   299 HTPTQLYEHYPSTDPIMRNNFAFYSVYTGGGGGVGVGMTSHEHLAAAAAAAAAVAQGTTPNIDE- 362
                       |...:.|.                  |...|   ||.|||.|.|.....|..| 
Mosquito   219 -----------SVQVVKRE------------------MIEKE---AALAAATAAANNNNNNPPET 251

  Fly   363 ----VIQDTLKDECFEDG----------HSTDYHV------------LTSVSDMHTLKDSSPYAL 401
                |...|:..|...||          ....||.            |...|.:|:.....|: |
Mosquito   252 TIIPVQTQTIFVEYKNDGEEPVRYVNRYEDVKYHPHSRYIYQQPPGGLPLSSTLHSTGSGHPH-L 315

  Fly   402 THEQLHQQQHHHQQQLHHHQQQQQQLYHQQQQQQQQQQHHHHHNNSTSSAGGDSPSSSHALSTLQ 466
            :|...|...|||.             :|........|.|||.|..|                   
Mosquito   316 SHHPHHAHHHHHP-------------HHGHGMVPGHQTHHHVHAQS------------------- 348

  Fly   467 SFTQLTSATQRDSLSPENDAYFAAAQLGSSLQNSSVYAGSLLTQTANGIQYGMQSPNQTQAHLQQ 531
                                    ||:..:::..|.:..|:...|.:|          |...:|.
Mosquito   349 ------------------------AQVHQTIEAVSQHPSSVAVATQSG----------TTIQVQA 379

  Fly   532 QHHQQQQQQHQQHQQQQLQQQQQQHHHNQHQHHNSSSSSPGPAGLHHSSSSAATAAAVAAATAAV 596
            |.|||..|.::.|:                       ...||.|        .....||..|...
Mosquito   380 QPHQQTIQVYETHE-----------------------PGSGPGG--------EQVQQVAEGTVDA 413

  Fly   597 NGHNSSLEDGY--GSPRSSHSGGGGGGT------LPAFQRIAY----PN-----------SGSV- 637
            ..|.::||..:  .||::.:....|..|      ||..:.|.|    ||           |.|: 
Mosquito   414 KTHYTNLEPVHTLASPQNYYIASDGYATGNYTTFLPQKETIYYHSPSPNPVLYKGDPTLTSSSII 478

  Fly   638 ---ERYAPITNYRGQNDTWFDPLSYATSSSGQAQL--GVGVGAGVVSNVIRNGRAISAANAAAAA 697
               ..|.|  :..|..:.:.:...:::||.|..|:  |...||||..|....| .|...||....
Mosquito   479 TKQIHYTP--SLPGTQNMYENATGHSSSSPGAQQIYPGYWNGAGVDYNTNFTG-TIVMDNAGGNV 540

  Fly   698 AADGTTGRVDPGTFLSASASLSAMAAESGGDFYKP---------NSFNVGGG----------GRS 743
            ....|.|:        .|..:|::     .|.|.|         ...|.|..          |.:
Mosquito   541 GEYATNGQ--------HSWQISSL-----NDAYDPQLAAPPEHRECVNCGSSDTPLWRRDIVGHT 592

  Fly   744 KANTSGAASSYS--CPGSNATSAATSAVASGTAATAATTLDEHVSRANSRRLSASKRAGLSCSNC 806
            ..|   |.:.|:  .||:| .....|..|..|..|...              ..::|:|::|:||
Mosquito   593 LCN---ACALYTRQNPGTN-RPPNRSQKAKQTVKTPPA--------------QGNRRSGVTCANC 639

  Fly   807 HTTHTSLWRRNPAGEPVCNACGLYYKLHSVPRPLTMKKDTIQKRKRKPKGTKSEKSKSKSKNALN 871
            .||.|:|||||..|:|||||||||||||||.||||||||.||.||||||.::.            
Mosquito   640 QTTTTTLWRRNNQGDPVCNACGLYYKLHSVNRPLTMKKDGIQTRKRKPKSSQQ------------ 692

  Fly   872 AIMESGSLVTNCHNVGVVLDSSQMDVNDDMKPQLDLKPYNSYSSQ------PQQQLPQYQQQQQL 930
             |.....|.|     |.:|            |.:....|:|.:::      ||..|.|..|..:|
Mosquito   693 -IQPMNGLTT-----GKLL------------PSMIPSQYHSIATEPKLLNAPQSHLVQTSQPMEL 739

  Fly   931 LMADQHSSAASSPHSMGSTSLSPSA 955
                .:||....|..:.|   ||.|
Mosquito   740 ----HNSSPGQDPRYVDS---SPGA 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
srpNP_732100.2 ZnF_GATA 802..853 CDD:238123 39/50 (78%)
LOC4577427XP_061499905.1 None

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