Protein Alignment srp and gata3

DIOPT Version :9

• Sequence 1: NP_732100.2
• Gene: srp / 41944
• FlyBaseID: FBgn0003507
• Length: 1264
• Species: Drosophila melanogaster
• Sequence 2: NP_001004967.1
• Gene: gata3 / 448391
• XenbaseID: XB-GENE-485930
• Length: 437
• Species: Xenopus tropicalis
• Alignment Length: 508
• Identity: 129/508 - (25%)
• Similarity: 179/508 - (35%)
• Gaps: 147/508 - (28%)

  Fly   535 QQQQQQHQQHQQQQLQQQQQQHHHNQHQHHNSSSSSP----------GPAGLHHSSSSAATAAAV 589
            :|.:.....|....|..|....||..|.:.:.:...|          ...|.|..|..:.:...|
 Frog     6 EQPRWVSHPHHPALLNGQHSDSHHPVHNYIDPTQYPPPEDMDVLFNIDGQGNHVPSYYSNSVRTV 70

  Fly   590 AAATAAVNG----HNSSLE---DGYGSPRSSHSGGGGGGTLPAFQRIAYPNS-GSVERYAP---- 642
            .......:|    |.|.|:   ||..|....|:  .....||..:...:.|| |.:..|.|
 Frog    71 PRYPPPHHGSLVCHPSILQSWTDGRKSLGGPHA--ASAWNLPFAKPSIHHNSPGGLSVYPPASSA 133

  Fly   643 --ITNYRGQNDTWFDP-------------LSYATSSSGQAQLGVGV----------GAGVVSNVI 682
              .|.:...:...|.|             .|.:||||...:....|          |..:.|:..
 Frog   134 SLATGHSSPHLFTFPPTPPKDVSPDPSISTSVSTSSSRHEEKECVVSKYQVSLSEPGMKLESSHP 198

  Fly   683 RNGRAISAANAAAAAAADGTT-------GRVDPGTFLSASASLSAMAAESGGDFYKPNSFNVGGG 740
            ||  ::|.....::|....||       |...||:.|..|                |..|.....
 Frog   199 RN--SMSGIGGVSSAHHPITTYPDYYGAGLFQPGSILDGS----------------PTHFPSKPR 245

  Fly   741 GRSKANTSGAASSYSCPGSNATSAAT-SAVASGTAATAATTLDEHVSRAN------SRRLSASKR 798
            .:::::|.|.    .|....|||... ....:|.....|..|...::..|      .|||||::|
 Frog   246 PKTRSSTEGR----ECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARR 306

  Fly   799 AGLSCSNCHTTHTSLWRRNPAGEPVCNACGLYYKLHSVPRPLTMKKDTIQKRKRKPKGTKSEKSK 863
            ||.||:||.||.|:|||||..|:|||||||||||||::.|||||||:.||.|.|| ..:||:|||
 Frog   307 AGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQTRNRK-MSSKSKKSK 370

  Fly   864 SKSKNALNAIMESGSLVTNCHNVGVVLDSSQMDVNDDMKPQLDLKPYNSYSSQPQQQLPQYQQQQ 928
                                                        |.::|....|:
 Frog   371 --------------------------------------------KIHDSLEDYPK---------- 381

  Fly   929 QLLMADQHSSAASSPHSMGSTSLSPSAMSHQHQTHPHQQQQQQLCSGLDMSPN 981
                :...|.||.|.|....:.:||.:.|....|.|......   |||...|:
 Frog   382 ----SSSFSPAALSRHMSSLSHISPFSHSSHMLTTPTPMHAP---SGLSFGPH 427

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
srp	NP_732100.2	ZnF_GATA	798..847	CDD:214648	36/48 (75%)
		ZnF_GATA	802..853	CDD:238123	36/50 (72%)
gata3	NP_001004967.1	ZnF_GATA	256..306	CDD:238123	13/49 (27%)
		ZnF_GATA	310..360	CDD:238123	36/49 (73%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000130
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1745
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.030