Protein Alignment srp and gata6

DIOPT Version :9

• Sequence 1: NP_732100.2
• Gene: srp / 41944
• FlyBaseID: FBgn0003507
• Length: 1264
• Species: Drosophila melanogaster
• Sequence 2: NP_989422.1
• Gene: gata6 / 395062
• XenbaseID: XB-GENE-485063
• Length: 524
• Species: Xenopus tropicalis
• Alignment Length: 571
• Identity: 152/571 - (26%)
• Similarity: 197/571 - (34%)
• Gaps: 187/571 - (32%)

  Fly   448 TSSAGGDSPSSSHALS-----------TLQSFTQL---TSATQRDSLSPE---NDAY----FAAA 491
            |.||.|....|.|.|.           .|....:|   ...|:..|..||   .|.|    ..||
 Frog    80 TISAEGRPAPSYHPLGLSHPEDLILFRDLDHINKLIVPNRETRYSSALPEPPAGDMYQTLTITAA 144

  Fly   492 Q--LG---------SSLQNSSVY-----AGSLLTQTANGIQYGMQSPNQTQ-AHLQQQHHQQQQQ 539
            |  ||         .|..:|.||     .||:||    .|.| :|....:| ||....|..|...
 Frog   145 QGPLGYDHSQGTFMHSAASSPVYVPTSRVGSMLT----SISY-LQGTGASQGAHSVNNHWSQATS 204

  Fly   540 QHQQHQQQQLQQQQQQHHHNQHQHHNSSSSSPGPAGLHHSSSSAATAAAVAAATAAVNGHNSSLE 604
            :..                      :.|||||..:..:|.|.|...|          ||  |:.:
 Frog   205 EGS----------------------SFSSSSPHTSSRYHYSPSPPMA----------NG--STRD 235

  Fly   605 DGYGSPRSSHSGGGGGGTLPAFQRIAYPNSGSVERYAPITNYRGQNDT--W----FDPLSYATSS 663
            .||.   ||.:..|.....|    :|.|.:||..  :|.|.|.....|  |    ||.....:..
 Frog   236 TGYS---SSLTVSGRDQYTP----LARPLNGSYG--SPYTPYMAPQLTSAWPAGPFDNTMLHSLQ 291

  Fly   664 SGQAQLGVGVGAGVVSNVIRNGRAISAANAAAAAA----ADGTTGRVDPGTFLSASASLSAMAAE 724
            |..|.:.|....|.|.:.:...|  ...|..:...    .|||      |.:|..:..|.:....
 Frog   292 SRGAPINVRGAPGDVLDELPESR--ECVNCGSVQTPLWRRDGT------GHYLCNACGLYSKMNG 348

  Fly   725 SGGDFYKPNSFNVGGGGRSKANTSGAASSYSCPGSNATSAATSAVASGTAATAATTLDEHVSRAN 789
            ......||
 Frog   349 LSRPLIKP--------------------------------------------------------- 356

  Fly   790 SRRLSASKRAGLSCSNCHTTHTSLWRRNPAGEPVCNACGLYYKLHSVPRPLTMKKDTIQKRKRKP 854
            .:|:.:|:|.||:|:|||||.|:|||||..|||||||||||.|||.|||||.|||:.||.|||||
 Frog   357 QKRVPSSRRIGLACANCHTTTTTLWRRNTEGEPVCNACGLYMKLHGVPRPLAMKKEGIQTRKRKP 421

  Fly   855 KGTKSEKSKSKSKNALNAIMESGSLVT------NC-------HNVGVVLDSSQMDVNDDMKPQLD 906
            |.....||.|.:.|:.:.|..:.:..|      :|       .|...|:.||.|....|
 Frog   422 KNLNKSKSSSSNGNSSHQIPMTPTSTTSSTNSDDCIKNGSPSQNTAPVVASSLMSTQTD------ 480

  Fly   907 LKPYNSYSSQPQQQLPQYQQQQQLLMADQHSSAASSPHSMGSTSLSPSAMS 957
                   |:.|.....:|..|..|..|...|||:....|:...|....|::
 Frog   481 -------STSPNSNTLKYTGQDGLYSAVSLSSASEVAASVRQDSWCALALA 524

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
srp	NP_732100.2	ZnF_GATA	798..847	CDD:214648	37/48 (77%)
		ZnF_GATA	802..853	CDD:238123	38/50 (76%)
gata6	NP_989422.1	GATA-N	135..304	CDD:368398	54/216 (25%)
		ZnF_GATA	315..360	CDD:238123	9/107 (8%)
		ZnF_GATA	369..420	CDD:238123	38/50 (76%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000130
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1745
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.940