Protein Alignment srp and Gata2

DIOPT Version :9

• Sequence 1: NP_732100.2
• Gene: srp / 41944
• FlyBaseID: FBgn0003507
• Length: 1264
• Species: Drosophila melanogaster
• Sequence 2: NP_254277.1
• Gene: Gata2 / 25159
• RGDID: 2664
• Length: 480
• Species: Rattus norvegicus
• Alignment Length: 522
• Identity: 135/522 - (25%)
• Similarity: 185/522 - (35%)
• Gaps: 141/522 - (27%)

  Fly   519 MQSPNQTQAHLQQQHHQQQQQQHQQHQQ-----------QQLQQQQQQHHHNQHQHHNSSSSSPG 572
            |..|....|.....||......:.:..|           ..|..|...::.|........|.||.
  Rat    11 MAHPAVLNAQHPDSHHPGLAHNYMEPAQLLPPDEVDVFFNHLDSQGNPYYANPAHARARVSYSPA 75

  Fly   573 PAGL--------H--HSSSSAATAAAVAAATAAVNGHNS--------------SLEDGYGSPRSS 613
            .|.|        |  ||..........||.:||...|:|              |.....|.|.|.
  Rat    76 HARLTGGQMCRPHLLHSPGLPWLDGGKAALSAAAAHHHSPWTVSPFSKTPLHPSAAGAPGGPLSV 140

  Fly   614 H---SGGGGGGTLPAFQRIAYPNSGSVERYAPITNYRGQNDTWFDP-----LSYATSSSGQAQ-L 669
            :   :||.|||           :..||....|...:.|.:...|.|     :|...|::|.|. .
  Rat   141 YPGAAGGSGGG-----------SGSSVASLTPTAAHSGSHLFGFPPTPPKEVSPDPSTTGAASPA 194

  Fly   670 GVGVGAGVVSNVIRNGRAISAANAAAAAAADGTTGR-------VDPGT---FLSASASLSAMAAE 724
            ....|..|.....::|.....:.:.:.....|:..|       ..|.|   ..:..:.:.|.|.|
  Rat   195 SPSAGGSVARGEDKDGVKYQVSLSESMKMEGGSPLRPGLAPMGTQPATHHPIPTYPSYVPASAHE 259

  Fly   725 SGGDFYKPNSFNVGGGGRSKANTSGAASSYSCPGSNATSAATSAVASGTAATA------------ 777
            .|...:.|..|.  ||..|.......:.:.||      |.....|..|..||.
  Rat   260 YGSGLFHPGGFL--GGPASSFTPKQRSKARSC------SEGRECVNCGATATPLWRRDGTGHYLC 316

  Fly   778 -ATTLDEHVSRAN------SRRLSASKRAGLSCSNCHTTHTSLWRRNPAGEPVCNACGLYYKLHS 835
             |..|...::..|      .|||||::|||..|:||.||.|:|||||..|:|||||||||||||:
  Rat   317 NACGLYHKMNGQNRPLIKPKRRLSAARRAGTCCANCQTTTTTLWRRNANGDPVCNACGLYYKLHN 381

  Fly   836 VPRPLTMKKDTIQKRKRKPKGTKSEKSKSKSK--NALNAIMESGSLVTNCHNVGVVLDSSQMDVN 898
            |.|||||||:.||.|.|| ..:||:|||..::  ..|:..|:..|
  Rat   382 VNRPLTMKKEGIQTRNRK-MSSKSKKSKKGAECFEELSKCMQEKS-------------------- 425

  Fly   899 DDMKPQLDLKPYNSYS----SQPQQQLPQYQQQQQLLMADQ--HSSAASS---PHSMGSTSLSPS 954
                     .|:::.:    ..|...||.:.....:|....  |.|::.|   ||        ||
  Rat   426 ---------SPFSAAALAGHMAPVGHLPPFSHSGHILPTPTPIHPSSSLSFGHPH--------PS 473

  Fly   955 AM 956
            :|
  Rat   474 SM 475

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
srp	NP_732100.2	ZnF_GATA	798..847	CDD:214648	36/48 (75%)
		ZnF_GATA	802..853	CDD:238123	36/50 (72%)
Gata2	NP_254277.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	166..208		9/41 (22%)
		ZnF_GATA	294..344	CDD:238123	12/49 (24%)
		ZnF_GATA	349..398	CDD:238123	36/48 (75%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	457..480		8/27 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166334656
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5641
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000130
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10071
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.930