DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment srp and med-2

DIOPT Version :9

Sequence 1:	NP_732100.2	Gene:	srp / 41944	FlyBaseID:	FBgn0003507	Length:	1264	Species:	Drosophila melanogaster
Sequence 2:	NP_498497.1	Gene:	med-2 / 191706	WormBaseID:	WBGene00003181	Length:	174	Species:	Caenorhabditis elegans

Alignment Length:	134	Identity:	36/134 - (26%)
Similarity:	57/134 - (42%)	Gaps:	17/134 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly   730 YKPNSFNVGGGGRSKANTSGAASSYSCPGSNATSAATSAVASGTAATAATTLDEHVSRANSRRLS 794
            |.|.:.:     .|..|.|....|   |.|:..:..|......|:.:.:|......|.:::::
Worm    56 YYPTAMD-----SSSLNISPTTGS---PNSSHFTTFTHFSTPSTSPSTSTQSSTPPSNSDNKK-- 110

  Fly   795 ASKRAGLSCSNCHTTHTSLWRRNPAGEPV-CNACGLYYKLHSVPRPLTMKKDTIQKRKRKPKGTK 858
                 ...||||..|.|..||...:.|.: ||||.:|.:.::..||:| ..:..||||.|.:.|.
Worm   111 -----SFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYNETRPVT-AVNKYQKRKLKVQETN 169

  Fly   859 SEKS 862
            ...|
Worm   170 GVDS 173

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
srp	NP_732100.2	ZnF_GATA	798..847	CDD:214648	17/49 (35%)
srp	NP_732100.2	ZnF_GATA	802..853	CDD:238123	21/51 (41%)
med-2	NP_498497.1	ZnF_GATA	113..157	CDD:238123	17/44 (39%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5641
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810