Protein Alignment srp and end-3

DIOPT Version :9

• Sequence 1: NP_732100.2
• Gene: srp / 41944
• FlyBaseID: FBgn0003507
• Length: 1264
• Species: Drosophila melanogaster
• Sequence 2: NP_506480.1
• Gene: end-3 / 191631
• WormBaseID: WBGene00001311
• Length: 242
• Species: Caenorhabditis elegans
• Alignment Length: 182
• Identity: 45/182 - (24%)
• Similarity: 68/182 - (37%)
• Gaps: 31/182 - (17%)

  Fly   698 AADGTTGRVDPGTFLSASASLSAMAAESGGDFYKPN--------------------SFNVGGGGR 742
            |.|.||...:.|  ...|...:.|..::|..:|..|                    .|.......
 Worm    55 AQDMTTNSYNGG--YDNSMQQNFMQPDNGAGYYNENYQQMPDFQFPVQNFDFTNQFEFTTPINDL 117

  Fly   743 SKANTSGAASSYSCPGSNATSAATSAVASGTAATAATTLDE-----HVSRANSRRLSASKRAGLS 802
            .::.||   .:::.|.:|..|.....:..|.....|..:.|     ..|:...:::| :.....|
 Worm   118 QQSQTS---INHTNPDNNENSMPEIPIDGGFNFFPAQEVQEWKPARKASKNKIKKIS-TMHINSS 178

  Fly   803 CSNCHTTHTSLWRRNPAGEPVCNACGLYYKLHSVPRPLTMKKDTIQKRKRKP 854
            ||||....|.|||||..||..||.|.||.::....||..:......||:|:|
 Worm   179 CSNCGCRETKLWRRNEQGETECNPCNLYERVKGHKRPQHLWNKPAAKRRRRP 230

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
srp	NP_732100.2	ZnF_GATA	798..847	CDD:214648	20/48 (42%)
		ZnF_GATA	802..853	CDD:238123	22/50 (44%)
end-3	NP_506480.1	ZnF_GATA	178..229	CDD:238123	22/50 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5641
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000130
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10071
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.910