Protein Alignment srp and elt-3

DIOPT Version :9

• Sequence 1: NP_732100.2
• Gene: srp / 41944
• FlyBaseID: FBgn0003507
• Length: 1264
• Species: Drosophila melanogaster
• Sequence 2: NP_001367208.1
• Gene: elt-3 / 181503
• WormBaseID: WBGene00001251
• Length: 317
• Species: Caenorhabditis elegans
• Alignment Length: 66
• Identity: 31/66 - (46%)
• Similarity: 43/66 - (65%)
• Gaps: 3/66 - (4%)

  Fly   803 CSNCHTTHTSLWRRNPAGEPVCNACGLYYKLHSVPRPLTMKKDTIQKRKRKPKGTKSEKSKSKSK 867
            ||||.|..|:|||||..|...||||.||::.::..|||:::||.|.||.|:|   ::|...|..:
 Worm   244 CSNCKTRETTLWRRNGEGGVECNACNLYFRKNNRKRPLSLRKDGIMKRNRRP---RNESPNSAIR 305

  Fly   868 N 868
            |
 Worm   306 N 306

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
srp	NP_732100.2	ZnF_GATA	798..847	CDD:214648	23/43 (53%)
		ZnF_GATA	802..853	CDD:238123	26/49 (53%)
elt-3	NP_001367208.1	ZnF_GATA	243..294	CDD:238123	26/49 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000130
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10071
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.010