Protein Alignment srp and elt-1

DIOPT Version :9

• Sequence 1: NP_732100.2
• Gene: srp / 41944
• FlyBaseID: FBgn0003507
• Length: 1264
• Species: Drosophila melanogaster
• Sequence 2: NP_001033435.1
• Gene: elt-1 / 177794
• WormBaseID: WBGene00001249
• Length: 488
• Species: Caenorhabditis elegans
• Alignment Length: 488
• Identity: 128/488 - (26%)
• Similarity: 197/488 - (40%)
• Gaps: 117/488 - (23%)

  Fly   507 LLTQTANGIQYGMQSPNQTQAHLQQQHHQQQQQQ---HQQHQQQQLQQQQQQHHHNQHQHHNSSS 568
            :|.....|..:.||:.|:.:|.|...........   ...|..|.::|:...:.....:....:|
 Worm    23 MLDGVVGGEDHDMQNTNEVRAELDSLLRLDPDTNSIIDALHISQPIEQENMDYEGKPVEFTLGTS 87

  Fly   569 SSPGPAGLHHSSSSAATAAAVAAATAAVNGHNSSLEDGYGSPRSSH----SGGGGGGT-----LP 624
            |  |.|.|  :.:|:.|||::|..:     :|:|..:.|.:..||:    :....|||     :.
 Worm    88 S--GGASL--APTSSTTAASIAPFS-----YNTSATNYYNTTPSSYPMFLNYQYAGGTTVTTDMD 143

  Fly   625 AFQRI-------AYPNSGSVERYAPITNYRGQNDTWFDPLSYATSSSG----QAQLGVGVGAG-- 676
            ||..:       .:....:...:.|.|..   |...:|.|:.||::||    ..||.|.:..|
 Worm   144 AFSGMDMSMNNGVFGTQNNPSYFYPTTQL---NTYGYDTLAAATTASGITVNNNQLNVNIVQGNG 205

  Fly   677 -------------VVSNV-----IRNGRAISAANAAAAAAADGTTGRVDPGTFLSASASLSAMAA 723
                         .||||     |.|.:.::....|..:.:.|           |:|||.|:
 Worm   206 TIVPQPITQNIISTVSNVQSSVPINNSQPLTPTGLAGCSTSSG-----------SSSASSSS--- 256

  Fly   724 ESGGDFYKPNSFNVGGGGRSKAN-TSGAASSYSCPGSNATSAATSAVASGTAATAATTLD----- 782
                    .||.:......|||| :||.|::     |..::.....|..|...|.....|
 Worm   257 --------ANSTSTPKNTISKANRSSGGANN-----SQFSTEDRECVNCGVHNTPLWRRDGSGNY 308

  Fly   783 -----------EHVSR----ANSRRLSASKRAGLSCSNCHTTHTSLWRRNPAGEPVCNACGLYYK 832
                       .|.:|    ...|:.:|.||.|:.|.||.|..|:|||||..|.|||||||||:|
 Worm   309 LCNACGLYFKMNHHARPLVKPKKRQQNAQKRTGIECVNCRTNTTTLWRRNGEGHPVCNACGLYFK 373

  Fly   833 LHSVPRPLTMKKDTIQKRKRK--PKGTKSEKSKSKSKNALNAIMESGSLVTNCHNVGVVLDSSQM 895
            ||.|.||:|||||.||.|.||  .||::..|.::........:..:.|.:::    |:.||.|.:
 Worm   374 LHKVERPITMKKDGIQTRNRKLSAKGSRRMKKENGGTPTSMGMPTTSSSISS----GIELDQSGV 434

  Fly   896 DVNDDMKPQLDLKP-------YNSYSSQPQQQL 921
            ....:.:|.| :.|       .|.|.:..:.||
 Worm   435 WGMKNTQPML-MTPTAYAFPASNFYFNSIEDQL 466

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
srp	NP_732100.2	ZnF_GATA	798..847	CDD:214648	33/48 (69%)
		ZnF_GATA	802..853	CDD:238123	34/50 (68%)
elt-1	NP_001033435.1	ZnF_GATA	285..332	CDD:214648	6/46 (13%)
		ZnF_GATA	288..339	CDD:238123	8/50 (16%)
		ZnF_GATA	339..388	CDD:214648	33/48 (69%)
		ZnF_GATA	343..394	CDD:238123	34/50 (68%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000130
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10071
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1745
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	4.040