Protein Alignment srp and egl-18

DIOPT Version :9

• Sequence 1: NP_732100.2
• Gene: srp / 41944
• FlyBaseID: FBgn0003507
• Length: 1264
• Species: Drosophila melanogaster
• Sequence 2: NP_001294448.1
• Gene: egl-18 / 176992
• WormBaseID: WBGene00001186
• Length: 379
• Species: Caenorhabditis elegans
• Alignment Length: 484
• Identity: 108/484 - (22%)
• Similarity: 178/484 - (36%)
• Gaps: 160/484 - (33%)

  Fly   506 SLLTQTANGIQYGMQSPNQTQAHLQQQHHQQQQQ------------------------QHQQHQQ 546
            |::|:|         .|...    :||||:..|:                        :.....|
 Worm     4 SIMTET---------RPESA----EQQHHEVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQ 55

  Fly   547 QQLQQQQQQHHHNQHQHHNSSSSSPGPAGLHHSSSSAATAAAVAAATAAVNGHNSSLEDGYGSPR 611
            .:|.:..::::..:....:|..:||.||      .|.::...|....|.|:|....      .|:
 Worm    56 YRLDELLKENNELKSSSVSSGKASPSPA------ESRSSPKLVETVVAPVSGARKR------KPK 108

  Fly   612 SSHSGGGGGGTLPAFQRIAYPNSGSVERYAPITNYRGQNDTWFDPLSYATSSSGQAQLGVGVGAG 676
             ..|.......||.|..:                   .|...||||: .::.:|..||
 Worm   109 -ERSPPAAASPLPDFSNL-------------------MNGFMFDPLN-MSNPNGMMQL------- 145

  Fly   677 VVSNV------------IRNGRAISAANAAAAAAAD--------GTTGRVDPGTFLSASASLSAM 721
             :|.|            |.|.:::|...:.:....|        ..:.|.|..|...|...|.|:
 Worm   146 -LSMVQQQQQQQQHHQHIENQQSVSPPQSKSVKIEDPMDQDVKQEESERSDIPTATEAQNLLDAL 209

  Fly   722 AAESGGDFYKPNSFNVGGGGRSKANTSGAASSYSCPGSNATSAATSAVASGTAATAATTLDEHVS 786
            .|:          |:..|....:.:|:...||     |:...|...|||:.::.:..:::.|...
 Worm   210 TAQ----------FSSNGQAFFQTSTTSPPSS-----SSQVQAVIEAVATPSSQSQDSSMFEKTE 259

  Fly   787 RA---NSRRLSASKRAGLSCSNCHTTHTSLWRRNPAGEPVCNACGLYYKLHSVPRPLTMKKDTIQ 848
            .:   |:.|          ||||.|..|:.|||:..|:.|||.|||||:||.|.||:.|:|:.||
 Worm   260 TSGDPNAAR----------CSNCRTDKTTAWRRDAEGKLVCNPCGLYYRLHKVRRPIEMRKNHIQ 314

  Fly   849 KRKRKPKGTKSEKSKSKSKNALNAIMESGSLVTNCHNV---GVVLDSSQMDVNDDMKPQLDLKPY 910
            :|.|:       |:|.|..:|...|.  ..|:|....:   ||..|.:             :..:
 Worm   315 QRYRR-------KNKEKESSAATQIF--NQLLTQMPTMATGGVSTDGA-------------INTF 357

  Fly   911 NSYSSQPQQQLPQYQQQQQLLMADQHSSA 939
            |..     :|:.|:.|.|:|:    :|||
 Worm   358 NLL-----EQISQFTQAQELM----NSSA 377

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
srp	NP_732100.2	ZnF_GATA	798..847	CDD:214648	25/48 (52%)
		ZnF_GATA	802..853	CDD:238123	28/50 (56%)
egl-18	NP_001294448.1	ZnF_GATA	268..320	CDD:238123	30/68 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000130
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910