DRSC/TRiP Functional Genomics Resources

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Protein Alignment srp and Zglp1

DIOPT Version :9

Sequence 1:NP_732100.2 Gene:srp / 41944 FlyBaseID:FBgn0003507 Length:1264 Species:Drosophila melanogaster
Sequence 2:NP_001096638.1 Gene:Zglp1 / 100009600 MGIID:3696042 Length:266 Species:Mus musculus


Alignment Length:94 Identity:31/94 - (32%)
Similarity:41/94 - (43%) Gaps:24/94 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   753 SYSCPGSNATSAATSAVASGTAATAATTLDEHVSRANSRRLSASKRAGLSCSNCHTTHTSLWRRN 817
            :||.||   .|.:....||.:.|.|        |..:|..|...:     |::|.|..|.|||..
Mouse   163 TYSLPG---RSCSQKLPASPSKALA--------SPGSSEALGPRR-----CASCRTQRTPLWRDA 211

  Fly   818 PAGEPVCNACGLYYKLHS--------VPR 838
            ..|.|:|||||:.||.:.        |||
Mouse   212 EDGTPLCNACGIRYKKYGTRCSSCWLVPR 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
srpNP_732100.2 ZnF_GATA 798..847 CDD:214648 19/49 (39%)
ZnF_GATA 802..853 CDD:238123 19/45 (42%)
Zglp1NP_001096638.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 106..129
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..191 6/27 (22%)
ZnF_GATA 194..>231 CDD:214648 16/41 (39%)
GATA 197..231 CDD:278735 16/33 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830954
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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