DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and Smarca5

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_444354.2 Gene:Smarca5 / 93762 MGIID:1935129 Length:1051 Species:Mus musculus


Alignment Length:656 Identity:207/656 - (31%)
Similarity:303/656 - (46%) Gaps:98/656 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1290 LLSTHCFANLVQLMPLDGKTEQLKSDPLQARKTRDREFLDYLFNPKSIPNYK------------- 1341
            |..|..||:.:|  |...||   .:.||:.:..|.|...|...|..|:.:|:             
Mouse    95 LKQTELFAHFIQ--PAAQKT---PTSPLKMKPGRPRVKKDEKQNLLSVGDYRHRRTEQEEDEELL 154

  Fly  1342 -------------VPVPISV---ELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILA 1390
                         ...|..|   :||.||..|:|||..|.:..::|||.|:||||||||||.:|.
Mouse   155 TESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLG 219

  Fly  1391 GDHMHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLRSDI--GT 1453
            ....:|....    |.:|:.|.:...:|:.|.:|::   ..||.:...|....|.....|:  ..
Mouse   220 YMKHYRNIPG----PHMVLVPKSTLHNWMSEFKKWV---PTLRSVCLIGDKEQRAAFVRDVLLPG 277

  Fly  1454 KCNLVVASYDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNN 1518
            :.::.|.||:.:.|:...|...::.|.|:||.|.|||.|:|.|:.::..|..:||:|:|||:|||
Mouse   278 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNN 342

  Fly  1519 VLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRV 1583
            :.|||||.:||:|....:...|...|        |..:...:|:    .:|.||..:.||||||:
Mouse   343 LHELWSLLNFLLPDVFNSADDFDSWF--------DTNNCLGDQK----LVERLHMVLRPFLLRRI 395

  Fly  1584 KEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQA 1648
            |.||.|.||||....:...||.:|...|.....|.: |.|:..|...           |..:...
Mouse   396 KADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDI-DILNSAGKMD-----------KMRLLNI 448

  Fly  1649 LRYLQNVCNHPKLVLRQSEELTKVTSQLALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQ 1713
            |..|:..||||.| ...:|.....|:.:.|..:|...:.....||.||:              ..
Mouse   449 LMQLRKCCNHPYL-FDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKE--------------QG 498

  Fly  1714 HRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSID-VLLLTTMV 1777
            .|.|||.|:..:|||:|...:.|   :..|.||||..|..:|||.:|.:|...|.. |.:|:|..
Mouse   499 SRVLIFSQMTRVLDILEDYCMWR---NYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRA 560

  Fly  1778 GGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKIL 1842
            ||||:||..||.||..:.||||..|||||||||||||.|.|.|:|.||.|::||:|:...:.|:.
Mouse   561 GGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLR 625

  Fly  1843 TANTVVS---AENASLQTMGTSQIFDLFNGG-----KDKGAESGSSAVQGTASGG----MSMNTI 1895
            ..:.|:.   ..:.:|..:|..::..:...|     ..|.:|.....:.|....|    ..||..
Mouse   626 LDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDEDIDGILERGAKKTAEMNEK 690

  Fly  1896 IENLPE 1901
            :..:.|
Mouse   691 LSKMGE 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 181/512 (35%)
Smarca5NP_444354.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..81
PLN03142 68..1011 CDD:215601 207/656 (32%)
DEAH box 307..310 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1014..1051
Blue background indicates that the domain is not in the aligned region.

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