DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and RAD26

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_012569.1 Gene:RAD26 / 853492 SGDID:S000003796 Length:1085 Species:Saccharomyces cerevisiae


Alignment Length:637 Identity:208/637 - (32%)
Similarity:311/637 - (48%) Gaps:107/637 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1336 SIPN------YKVPVPISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHM 1394
            :||:      :|:|..|...|..||:..:.||:.|.:.|..||:.|:||||||:|.|..:|..| 
Yeast   277 NIPDAKLNSQFKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALH- 340

  Fly  1395 HRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRP--LHYYGFPVGR------------- 1444
            |   :.|...|.|::||.|:...|..|.:.:...   ||.  ||..|..:..             
Yeast   341 H---SGLLTGPVLIVCPATVMKQWCNEFQHWWPP---LRTVILHSMGSGMASDQKFKMDENDLEN 399

  Fly  1445 -------------------------------EKLRSDIGTKCNLVVASYDTVRKDIDFFSGIHFN 1478
                                           :||...:.|..::::.:|..:|...|....:.:.
Yeast   400 LIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQ 464

  Fly  1479 YCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQR 1543
            |.||||||.|:|..::.|...|:||.::|:||||||||||:.||||||||:.||.|||...|.|:
Yeast   465 YAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVFQQQ 529

  Fly  1544 FSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQDLLCELSPLQL 1608
            |..||.....|.::..:.:.|.....||...:.|:||||||.||.||||.|....|.|:|:..|.
Yeast   530 FVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQR 594

  Fly  1609 RLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEELTKVT 1673
            ..|.:|.:            ||..:.:.   :.|.::...:..|:.:||||.|:.|.::.     
Yeast   595 SKYLEFLH------------SSDLNQIQ---NGKRNVLFGIDILRKICNHPDLLDRDTKR----- 639

  Fly  1674 SQLALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLRR-- 1736
                 .|....|.:.|.|:..:|||||       ......::||:|.|.:.||||:|:.:..:  
Yeast   640 -----HNPDYGDPKRSGKMQVVKQLLL-------LWHKQGYKALLFTQSRQMLDILEEFISTKDP 692

  Fly  1737 HLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDWNPMK 1801
            .|..:.|||:||:.....||.:|:.||:: |.||.||||.|||||:|||||:.:|..:.||||..
Yeast   693 DLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPST 756

  Fly  1802 DLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSAENASLQTMGTSQIFDL 1866
            |:||.:||.|||||:.|::|||:...|:||||...|.||....|.::: :....:.....::.||
Yeast   757 DMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILT-DPKQKRFFKIHELHDL 820

  Fly  1867 FNGGKDKGAESGSSAVQGTASGGMSMNTIIENLPELWSEHQYEEEYDLGNFV 1918
            |:    .|.|:|.|..:        :|..::...|.....:.||..|....|
Yeast   821 FS----LGGENGYSTEE--------LNEEVQKHTENLKNSKSEESDDFEQLV 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 192/554 (35%)
RAD26NP_012569.1 HepA <222..792 CDD:440319 191/554 (34%)
CSB_WHD 1019..1080 CDD:439329
Blue background indicates that the domain is not in the aligned region.

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