DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and INO80

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_011365.1 Gene:INO80 / 852728 SGDID:S000003118 Length:1489 Species:Saccharomyces cerevisiae


Alignment Length:876 Identity:217/876 - (24%)
Similarity:340/876 - (38%) Gaps:301/876 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1282 SDPDESVRLLSTHCFANLVQLMPLDGKTEQLKSDPLQARKTRDREFLDYLFNPKSIPNYKVPVP- 1345
            ::.||.:||.:....:|  .|.....|.:|. .|...|.:..:.|......||.|:....:..| 
Yeast   639 NENDEQLRLRAAENASN--ALAETRAKAKQF-DDHANAHEEEEEEDELNFQNPTSLGEITIEQPK 700

  Fly  1346 -ISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQTANLANL--PSL 1407
             ::..|:.||..|:|||..|....::|||.|:||||||:|:|.:||  |:    |...|:  |.|
Yeast   701 ILACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLA--HL----AENHNIWGPFL 759

  Fly  1408 VICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFP---------VGREKLRSDIGTKCNLVVASYD 1463
            |:.|.:...:||.|:.|||.|..:   |.|:|..         ..|:.||.:.....:::|.||.
Yeast   760 VVTPASTLHNWVNEISKFLPQFKI---LPYWGNANDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQ 821

  Fly  1464 TVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDF 1528
            .|..|.::...:.:.|.:|||...||:.::...|.:......:||:|:||||||::.|||:|..|
Yeast   822 MVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHF 886

  Fly  1529 LMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPP 1593
            :||....:..:|.:.||:.|.|..:|.:...:|:     :..||..:.||:|||||::|..:|..
Yeast   887 IMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQ-----LRRLHMILKPFMLRRVKKNVQSELGD 946

  Fly  1594 KITQDLLCELSPLQLRLYE----DFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQN 1654
            ||..|:||:|:..|.:||:    ..|..:  |.::....:.|.|....|..:..::..|:...:.
Yeast   947 KIEIDVLCDLTQRQAKLYQVLKSQISTNY--DAIENAATNDSTSNSASNSGSDQNLINAVMQFRK 1009

  Fly  1655 VCNHPKLVLRQSEE-------LTKVTSQL----------ALSNSSL------------------- 1683
            |||||.|..|...:       ..|.||.|          .:|||::                   
Yeast  1010 VCNHPDLFERADVDSPFSFTTFGKTTSMLTASVANNNSSVISNSNMNLSSMSSNNISNGKFTDLI 1074

  Fly  1684 -------------------------DDIEHSAKL------------------------------- 1692
                                     :|::.:.||                               
Yeast  1075 YSSRNPIKYSLPRLIYEDLILPNYNNDVDIANKLKNVKFNIFNPSTNYELCLFLSKLTGEPSLNE 1139

  Fly  1693 -------PALKQLL-------------------------------------------------LD 1701
                   |.||:::                                                 |:
Yeast  1140 FFRVSTTPLLKRVIERTNGPKNTDSLSFKTITQELLEVTRNAPSEGVMASLLNVEKHAYEREYLN 1204

  Fly  1702 C--------------------------------------------------------GIGVQ--- 1707
            |                                                        ||.|:   
Yeast  1205 CIQRGYHPNVSAPPVTIEVLGSSHVTNSINNELFDPLISQALSDIPAITQYNMHVKKGIPVEDFP 1269

  Fly  1708 --------------------------TESV--------------SQHRALIFCQLKAMLDIVEQD 1732
                                      |||.              ..||.||:.|:..|:|::|:.
Yeast  1270 KTGLFPEPLNKNFSSNISMPSMDRFITESAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEY 1334

  Fly  1733 LLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDW 1797
            |..|   ...::|||||.....|:|:|:::.::|.|.|.||:|..||||:|||.||||||.:.||
Yeast  1335 LTYR---QYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDW 1396

  Fly  1798 NPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSAENASLQTMGTSQ 1862
            ||..|.||||||||:||.:.|.||||:.|.::||::....|.|......|:.         |.:|
Yeast  1397 NPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVME---------GKTQ 1452

  Fly  1863 IFDLFNGGKDKGAESGSSAVQGTASGGMSMN 1893
            ..::      |..|.|.:..:.|..|..|::
Yeast  1453 EKNI------KTIEVGENDSEVTREGSKSIS 1477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 195/770 (25%)
INO80NP_011365.1 DBINO 469..602 CDD:464024
PLN03142 537..>1026 CDD:215601 125/405 (31%)
DEXQc_INO80 706..935 CDD:350760 82/242 (34%)
SF2_C_SNF 1295..1423 CDD:350180 59/130 (45%)
Blue background indicates that the domain is not in the aligned region.

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