DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and ISW1

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_009804.1 Gene:ISW1 / 852547 SGDID:S000000449 Length:1129 Species:Saccharomyces cerevisiae


Alignment Length:606 Identity:195/606 - (32%)
Similarity:303/606 - (50%) Gaps:90/606 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1308 KTE-QLKSDPLQARKTRDREFLDYLFNPKSIPNYKVPVPISVELRCYQQAGINWLWFLNKYNLHG 1371
            ||| :..::.|:...:.|.|.:::.|.       :.|..::.:||.||..|:|||..|:|..:.|
Yeast   160 KTEHEEDAELLKEEDSDDDESIEFQFR-------ESPAYVNGQLRPYQIQGVNWLVSLHKNKIAG 217

  Fly  1372 ILCDDMGLGKTLQTICILAGDHMHRQTANLANLPSLVICPPTLTGHWVYEVEK-------FLDQG 1429
            ||.|:||||||||||..|.   ..|....:.. |.|||.|.:...:|:.|:.:       |:.||
Yeast   218 ILADEMGLGKTLQTISFLG---YLRYIEKIPG-PFLVIAPKSTLNNWLREINRWTPDVNAFILQG 278

  Fly  1430 SVLRPLHYYGFPVGREKLRSDIGTKCNLVVASYDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTK 1494
            .........     ::||   :|...::|:|||:.:.::......|::.|.::||.|.|||.::.
Yeast   279 DKEERAELI-----QKKL---LGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESM 335

  Fly  1495 SSKAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAK 1559
            .|:.::...:.:||:::|||:|||:.|||:|.:||:|......:.|...||        ::|:.:
Yeast   336 LSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFS--------SESTEE 392

  Fly  1560 EQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLD 1624
            :|:.   .::.||..:.||||||:|.||...|.||...:|...:|.:|.:.|:    |.|:..||
Yeast   393 DQDK---IVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYK----KILEKDLD 450

  Fly  1625 KLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEELTKVTSQLALSNSSLDDIEHS 1689
            .:..|:.:.      .:||.:...:..|:..||||.| ...:|.....|:...|       :.::
Yeast   451 AVNGSNGSK------ESKTRLLNIMMQLRKCCNHPYL-FDGAEPGPPYTTDEHL-------VYNA 501

  Fly  1690 AKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQ 1754
            |||..|.:||..    ::.|.   .|.|||.|:..:|||:|.....|   :..|.|:|||.....
Yeast   502 AKLQVLDKLLKK----LKEEG---SRVLIFSQMSRLLDILEDYCYFR---NYEYCRIDGSTAHED 556

  Fly  1755 RQDIVNNFNS-DPSIDVLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVV 1818
            |...::::|: |....|.||||..||||:|||.||.|:..:.||||..|||||||||||||||.|
Yeast   557 RIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQV 621

  Fly  1819 NVYRLITRNSLEEKIMGLQKFKILTANTVVSAENASLQTM----------------GTSQIFDLF 1867
            .|:||:|.||:||||:.....|:.....|:.....||:..                |.:.:|   
Yeast   622 KVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMIQHGAADVF--- 683

  Fly  1868 NGGKDKGAESGSSAVQGTASG 1888
                ..|..:||:......||
Yeast   684 ----KSGTSTGSAGTPEPGSG 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 179/514 (35%)
ISW1NP_009804.1 PLN03142 108..1057 CDD:215601 195/606 (32%)
Blue background indicates that the domain is not in the aligned region.

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