DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and AT1G05120

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_001323244.1 Gene:AT1G05120 / 839319 AraportID:AT1G05120 Length:876 Species:Arabidopsis thaliana


Alignment Length:737 Identity:176/737 - (23%)
Similarity:261/737 - (35%) Gaps:249/737 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1343 PVPISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTI-CILAGDHMHRQTANLANLPS 1406
            |..:.:.|..||:..:.|.....:....|||.|:||:|||:|.| .:||...:.|.....|...:
plant   175 PSDLIMPLLRYQKEFLAWATKQEQSVAGGILADEMGMGKTIQAISLVLARREVDRAQFGEAAGCT 239

  Fly  1407 LVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLRSDIGTKCN--LVVASYDTVRKD- 1468
            ||:||......|:.|:.:|...||. :.|.|:|     .|...:|....|  .|:.:|.||..: 
plant   240 LVLCPLVAVSQWLNEIARFTSPGST-KVLVYHG-----AKRAKNIKEFMNYDFVLTTYSTVESEY 298

  Fly  1469 --------------------------IDFFSG--------------------------------- 1474
                                      :.:|.|                                 
plant   299 RRNIMPSKVQCAYCSKSFYPKKLVIHLRYFCGPSAVKTAKQSKQKRKKTSDSSSQQGKEADAGED 363

  Fly  1475 -------------------------------IHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRL 1508
                                           :.:|..:|||.|.||..::.:::|:..|:|.:|.
plant   364 KKLKKSKKKTKQTVEKDQLGSDDKEKSLLHSVKWNRIILDEAHYIKERRSNTARAVFALEATYRW 428

  Fly  1509 ILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDA------------------- 1554
            .|||||:||.|.||:||..||.          ::.:|.......|.                   
plant   429 ALSGTPLQNRVGELYSLIRFLQ----------IRPYSYYFCKDCDCRILDYVAHQSCPHCPHNAV 483

  Fly  1555 -------KSSAKEQEA------GVLAMEALHRQVL-PFLLRRVKEDVLKD--LPPKITQDLLCEL 1603
                   |..||....      |..||..|..:|| ..||||.|.....|  |||:|        
plant   484 RHFCWWNKYVAKPITVYGSFGLGKRAMILLKHKVLKDILLRRTKLGRAADLALPPRI-------- 540

  Fly  1604 SPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKT------HIFQALRYLQNVCNHPKLV 1662
                :.|..|..:....|..:.|..:|.|...| .:.|.|      |||..|..|:...:||.||
plant   541 ----ITLRRDTLDVKEFDYYESLYKNSQAEFNT-YIEAGTLMNNYAHIFDLLTRLRQAVDHPYLV 600

  Fly  1663 L--------------RQSEE--------------------------------LTKVT----SQL- 1676
            :              .:||:                                |.|||    |:| 
plant   601 VYSNSSGANANLVDENKSEQECGLCHDPAEDYVVTSCAHVFCKACLIGFSASLGKVTCPTCSKLL 665

  Fly  1677 --------------------------ALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHR 1715
                                      .|:...|||.:.|.|:.||::     .|....|.....:
plant   666 TVDWTTKADTEHKASKTTLKGFRASSILNRIKLDDFQTSTKIEALRE-----EIRFMVERDGSAK 725

  Fly  1716 ALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGL 1780
            |::|.|..:.||::...|.:   ..|:.::|.||:..:.|...:|.|..||...|.|::...||:
plant   726 AIVFSQFTSFLDLINYTLGK---CGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKAGGV 787

  Fly  1781 GLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTAN 1845
            .||||.|..|..::..|||..:.||.||.|||||.|.:.|.|.|..|::||:|:.|||.|.|...
plant   788 ALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILRLQKKKELVFE 852

  Fly  1846 TVVSAENASLQTMGTSQIFDLF 1867
            ..|.....::..:....:..||
plant   853 GTVGGSQEAIGKLTEEDMRFLF 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 173/717 (24%)
AT1G05120NP_001323244.1 HepA 38..856 CDD:440319 173/717 (24%)
RING-HC_RAD16-like 620..665 CDD:438229 5/44 (11%)
Blue background indicates that the domain is not in the aligned region.

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