DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and CHR1

DIOPT Version :9

Sequence 1:NP_001287351.1 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_201476.1 Gene:CHR1 / 836808 AraportID:AT5G66750 Length:764 Species:Arabidopsis thaliana


Alignment Length:586 Identity:177/586 - (30%)
Similarity:278/586 - (47%) Gaps:87/586 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1308 KTEQLKSDPLQARKTRDREFLDYLFNPKS------------------------------IPNYKV 1342
            ::|..|::|.:..:.|.|:......|.|:                              :.|...
plant   130 ESESQKAEPEKTGRGRKRKAASQYNNTKAKRAVAAMISRSKEDGETINSDLTEEETVIKLQNELC 194

  Fly  1343 PVPISVELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQTANLANLPSL 1407
            |:....:|:.||..|:.||..|.:..|:|||.|.||||||:|||..|:  |:   ..|..:.|.|
plant   195 PLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLS--HL---KGNGLDGPYL 254

  Fly  1408 VICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLR-----SDIGTKCNLVVASYDTVRK 1467
            ||.|.:...:|..|:.:|...   :..:.|:|....|::||     ..:|.|..:|:.||:....
plant   255 VIAPLSTLSNWFNEIARFTPS---INAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMN 316

  Fly  1468 DID-FFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMP 1531
            |.. ......:.|.|:||||.:||.|.|..:.:|.||.:::|:|:|||:|||:.|||||.:|::|
plant   317 DAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILP 381

  Fly  1532 GFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLA--MEALHRQVLPFLLRRVKEDVLKDLPPK 1594
            ....:..:|...|.   .|.::...:.||:|....|  :..||..:.||:|||:|.||...||.|
plant   382 DIFTSHDEFESWFD---FSEKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMKCDVELSLPRK 443

  Fly  1595 ITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHP 1659
            ....:...::..|.:..|...|..|:   ..||:::     ......|..:...:..|:..||||
plant   444 KEIIMYATMTDHQKKFQEHLVNNTLE---AHLGENA-----IRGQGWKGKLNNLVIQLRKNCNHP 500

  Fly  1660 KLVLRQSEELTKVTSQLALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESV------SQHRALI 1718
            .|:..|                    |:.|...|.:::::..||.....|.:      :.|:.||
plant   501 DLLQGQ--------------------IDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVLI 545

  Fly  1719 FCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSD-PSIDVLLLTTMVGGLGL 1782
            |.|...:|||::.....:   .....|:||||...:|:..:.:|:.: .|..:.||:|..||||:
plant   546 FSQWTKLLDIMDYYFSEK---GFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGI 607

  Fly  1783 NLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTV 1847
            |||.|||.|..:.||||..|||||||.|||||.|.|:||||.|..|:|.:::.....|:...:.|
plant   608 NLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVV 672

  Fly  1848 V 1848
            :
plant   673 I 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_001287351.1 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:288874
HEAT repeat 1234..1261 CDD:293787
HEAT repeat 1269..1298 CDD:293787
SNF2_N 1353..1662 CDD:278600 102/316 (32%)
DEXDc 1370..1514 CDD:238005 51/149 (34%)
Helicase_C 1689..1813 CDD:278689 48/130 (37%)
CHR1NP_201476.1 PLN03142 12..>739 CDD:215601 177/586 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D61251at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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