DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and CHR23

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_197432.2 Gene:CHR23 / 832051 AraportID:AT5G19310 Length:1064 Species:Arabidopsis thaliana


Alignment Length:602 Identity:190/602 - (31%)
Similarity:290/602 - (48%) Gaps:122/602 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1349 ELRCYQQAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILA----GDHMHRQTANLANLPSLVI 1409
            |||.||..|:.|:..|...:.:|||.|:||||||:|||.::|    ...:|.        |.|::
plant   385 ELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHG--------PHLIL 441

  Fly  1410 CPPTLTGHWVYE-------VEKFLDQGSVLRPLHYYGFPVGREKLRSDI-GTKCNLVVASYDTVR 1466
            .|..:..:|..|       :..||..||..:          |.::|:.| |.|.|:::..||.:.
plant   442 APKAVLPNWENEFALWAPSISAFLYDGSKEK----------RTEIRARIAGGKFNVLITHYDLIM 496

  Fly  1467 KDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAI---KRLKANHRLILSGTPIQNNVLELWSLFDF 1528
            :|..|...|.:||.::||||.:||.:...:|.:   .|:|  .||:|:||||||::.|||||.:|
plant   497 RDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIK--RRLLLTGTPIQNSLQELWSLLNF 559

  Fly  1529 LMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPP 1593
            |:|....:...|.:.|:.|......|..:.:|:   :|.:..||..:.||||||.|.:|.|.||.
plant   560 LLPHIFNSIHNFEEWFNTPFAECGSASLTDEEE---LLIINRLHHVIRPFLLRRKKSEVEKFLPG 621

  Fly  1594 KITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLG--DSSSASMVTENLSAKTHIFQALRYLQNVC 1656
            |....|.|::|..|...|:..::      :.::|  ..:..|...:||:.:         |:..|
plant   622 KTQVILKCDMSAWQKLYYKQVTD------VGRVGLHSGNGKSKSLQNLTMQ---------LRKCC 671

  Fly  1657 NHPKLV------LRQSEELTKVTSQLALSNSSLDDIEHSAKLPALKQLLLDCGIGVQTESVSQHR 1715
            |||.|.      :.:..|:.:.:.:..|    ||.:     ||.||:              :.||
plant   672 NHPYLFVGADYNMCKKPEIVRASGKFEL----LDRL-----LPKLKK--------------AGHR 713

  Fly  1716 ALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNS-DPSIDVLLLTTMVGG 1779
            .|:|.|:..::|::|   :...|....|||||||....||..::..||. |....:.||:|..||
plant   714 ILLFSQMTRLIDLLE---IYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGG 775

  Fly  1780 LGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKI-------MGLQ 1837
            |||||..|||:|..:.||||..|.||.||||||||||.|.|:.|::..|:||.|       ||:.
plant   776 LGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGID 840

  Fly  1838 KFKILTA---NTVVSAEN-----ASLQTMGTSQIFDLFNGGKDKGAESGSSAVQGTASGGMSMNT 1894
            . |::.|   ||..:|::     ..:.:.|||.:      |:|..:|...:.:.....       
plant   841 A-KVIQAGLFNTTSTAQDRREMLEEIMSKGTSSL------GEDVPSEREINRLAARTE------- 891

  Fly  1895 IIENLPELWSEHQYEEE 1911
                 .|.|...|.:||
plant   892 -----EEFWMFEQMDEE 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 178/533 (33%)
CHR23NP_197432.2 PLN03142 373..>893 CDD:215601 185/590 (31%)
SnAC 898..964 CDD:464219 3/6 (50%)
Blue background indicates that the domain is not in the aligned region.

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