DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hel89B and AT3G16600

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_188282.1 Gene:AT3G16600 / 820911 AraportID:AT3G16600 Length:638 Species:Arabidopsis thaliana


Alignment Length:641 Identity:165/641 - (25%)
Similarity:252/641 - (39%) Gaps:172/641 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1315 DPLQARKTRDREFLDY------LFNPKS---IPNYKVPVPISVELRCYQQAGINWLWFLNKYNLH 1370
            :.:|..||...|.:.|      |..||:   :|    |..::|.|..:|:..:||:....|.:.|
plant    13 EEVQEEKTTVNERVIYQAALQDLKQPKTEKDLP----PGVLTVPLMRHQKIALNWMRKKEKRSRH 73

  Fly  1371 ---GILCDDMGLGKTLQTICI-----LAGDHMHRQTANLANLPSLVICPPTLTGHWVYEV-EKFL 1426
               |||.||.|||||:.||.:     |......|:.....:..:|::||.::...|..|| ||..
plant    74 CLGGILADDQGLGKTISTISLILLQKLKSQSKQRKRKGQNSGGTLIVCPASVVKQWAREVKEKVS 138

  Fly  1427 DQGSVLRPLHYYGFPVGREKLRSDIGTKCNLVVASYDTV-------------------------R 1466
            |:..:...:|:     |..:      ||....:|.||.|                         |
plant   139 DEHKLSVLVHH-----GSHR------TKDPTEIAIYDVVMTTYAIVTNEVPQNPMLNRYDSMRGR 192

  Fly  1467 KDIDFFS----------GIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLE 1521
            :.:|..|          .:.:...||||.|.|||.:|..:||...|:|..|..|:||||:|.|.:
plant   193 ESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKACFSLRAKRRWCLTGTPIKNKVDD 257

  Fly  1522 LWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKED 1586
            |:|.|.||..........|.||...||         .|:...|...::|:.|.:   :|||.|| 
plant   258 LYSYFRFLRYHPYAMCNSFHQRIKAPI---------DKKPLHGYKKLQAILRGI---MLRRTKE- 309

  Fly  1587 VLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALRY 1651
                                     ..|..|...:...|..:.::...:.|:::   ::...|..
plant   310 -------------------------WSFYRKLELNSRWKFEEYAADGTLHEHMA---YLLVMLLR 346

  Fly  1652 LQNVCNHPKLV-----------------LRQSEELTKVTSQLALSNSSLDDIEHSAKLPALKQLL 1699
            |:..||||:||                 :...|.|......|.||:::........|.|.:..  
plant   347 LRQACNHPQLVNGYSHSDTTRKMSDGVRVAPRENLIMFLDLLKLSSTTCSVCSDPPKDPVVTL-- 409

  Fly  1700 LDCG-------IGVQTESVSQHRALIFCQLKAMLDIV-----------------EQDLL---RR- 1736
              ||       :.|.....:.....:.|..:...|:|                 :::.|   || 
plant   410 --CGHVFCYECVSVNINGDNNTCPALNCHSQLKHDVVFTESAVRSCINDYDDPEDKNALVASRRV 472

  Fly  1737 ---HLPSVTYLRLDGSVPASQRQDIVNNFNSDPSID----VLLLTTMVGGLGLNLTGADTVIFVE 1794
               ..||..   .|.||....||. .::.|.|.||.    .:|::...|.||||:..|..||.::
plant   473 YFIENPSCD---RDSSVACRARQS-RHSTNKDNSISGLVCAMLMSLKAGNLGLNMVAASHVILLD 533

  Fly  1795 HDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSA 1850
            ..|||..:.||:||||||||.:.|.|.|:..:|::||:|:.|.:.|   .|.|.||
plant   534 LWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVEERILTLHERK---RNIVASA 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 154/602 (26%)
AT3G16600NP_188282.1 HepA <12..588 CDD:440319 165/641 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.