DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hel89B and CHR11

DIOPT Version :9

Sequence 1:NP_001287351.1 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_001189826.1 Gene:CHR11 / 819814 AraportID:AT3G06400 Length:1057 Species:Arabidopsis thaliana


Alignment Length:662 Identity:203/662 - (30%)
Similarity:315/662 - (47%) Gaps:101/662 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1241 KIEQLIERQGA-IEAIERVVSRLQIKVVPYIVLLVVPLLGAMSDPDESVRLLSTHCFANLVQLMP 1304
            ||::::|.|.| |:|......:.::|.:                      |..|..||:..:   
plant    94 KIQEMLESQNASIDADMNNKGKGRLKYL----------------------LQQTELFAHFAK--- 133

  Fly  1305 LDGKTEQLKSDPLQARKTR------DREFL----DYLFNPKSIPNYKVPVPISVELRCYQQAGIN 1359
            .||.:.|.|:.......::      |.|:|    |.|....:......|..|..::|.||.||:|
plant   134 SDGSSSQKKAKGRGRHASKITEEEEDEEYLKEEEDGLTGSGNTRLLTQPSCIQGKMRDYQLAGLN 198

  Fly  1360 WLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQTANLANLPSLVICPPTLTGHWVYEVEK 1424
            ||..|.:..::|||.|:||||||||||.:||..|.:|.    .|.|.:|:.|.:..|:|:.|:.:
plant   199 WLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRG----INGPHMVVAPKSTLGNWMNEIRR 259

  Fly  1425 FLDQGSVLRPLHYYGFPVGREKLRSD--IGTKCNLVVASYDTVRKDIDFFSGIHFNYCVLDEGHI 1487
            |.   .|||.:.:.|.|..|..:|.|  :..|.::.|.|::...|:........:.|.::||.|.
plant   260 FC---PVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHR 321

  Fly  1488 IKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKQFVQRFSRPILSSR 1552
            |||..:..||.::....|:||:::|||:|||:.|||:|.:||:|....:.:.|.:.|.  |....
plant   322 IKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQ--ISGEN 384

  Fly  1553 DAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNK 1617
            |      :||    .::.||:.:.||||||:|.||.|.||||....|...:|.:|.:.|:....|
plant   385 D------QQE----VVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQK 439

  Fly  1618 HLKDCLDKLGDSSSASMVTENLSAKTHIFQALRYLQNVCNHPKLVLRQSEELTKVTSQLALSNSS 1682
            .| :.::..|:             :..:......|:..||||.|...........|....::|:.
plant   440 DL-EAVNAGGE-------------RKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAG 490

  Fly  1683 ----LDDIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLRRHLPSVTY 1743
                ||.:     ||.||:              ...|.|||.|:..:|||:|..|:.|   ...|
plant   491 KMVLLDKL-----LPKLKE--------------RDSRVLIFSQMTRLLDILEDYLMYR---GYLY 533

  Fly  1744 LRLDGSVPASQRQDIVNNFNSDPSID-VLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMD 1807
            .|:||:....:|...:..:|...|.. |.||:|..||||:||..||.||..:.||||..||||.|
plant   534 CRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQD 598

  Fly  1808 RAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSAEN--ASLQTMGTSQIFDLFNGG 1870
            |||||||||.|.|:|..|.:::|||::. :.:|.|..:.:|..:.  |..:|:...::..:...|
plant   599 RAHRIGQKKEVQVFRFCTESAIEEKVIE-RAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRYG 662

  Fly  1871 KDKGAESGSSAV 1882
            .:....|..|.:
plant   663 AEMVFSSKDSTI 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_001287351.1 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:288874
HEAT repeat 1234..1261 CDD:293787 7/20 (35%)
HEAT repeat 1269..1298 CDD:293787 3/28 (11%)
SNF2_N 1353..1662 CDD:278600 105/310 (34%)
DEXDc 1370..1514 CDD:238005 51/145 (35%)
Helicase_C 1689..1813 CDD:278689 49/124 (40%)
CHR11NP_001189826.1 PLN03142 33..1052 CDD:215601 203/662 (31%)
DEXDc 209..348 CDD:238005 51/145 (35%)
Helicase_C 505..604 CDD:278689 45/101 (45%)
HAND 756..>827 CDD:286232
SANT 845..889 CDD:238096
SLIDE 899..1008 CDD:286233
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D61251at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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