DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hel89B and CHR34

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_001325209.1 Gene:CHR34 / 816684 AraportID:AT2G21450 Length:823 Species:Arabidopsis thaliana


Alignment Length:618 Identity:143/618 - (23%)
Similarity:236/618 - (38%) Gaps:152/618 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1349 ELRCYQQAGINWLWFLNKYNLHG------ILCDDMGLGKTLQTICIL----AGDHMHRQTANLAN 1403
            |:|.:|..|..:|.    .||..      ||....|.|||...|..|    |.|...|       
plant   271 EMRPHQTEGFRFLC----NNLAADEPGGCILAHAPGSGKTFLLISFLQSFMAMDPQAR------- 324

  Fly  1404 LPSLVICPPTLTGHW-----VYEVEK--FLDQGSVL-----------------RPLHYYGFPVGR 1444
              .||:.|..:...|     ::||||  .||..||.                 |.:.:.|:....
plant   325 --PLVVLPKGIIESWKREFTLWEVEKIPLLDFYSVKAESRKQQLKVLGQWIKERSILFLGYQQFT 387

  Fly  1445 EKLRSD----IGTKCNLVVASYDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKAN 1505
            ..:..|    ....|.|::....|:              .:|||||..:|.:|....::.|:|..
plant   388 RIICDDNFEAASEDCKLILLEKPTL--------------LILDEGHTSRNKETYMLSSLARVKTR 438

  Fly  1506 HRLILSGTPIQNNVLELWSLFDFLMPGFL---GTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLA 1567
            .:::|:||..||||.|::::.|.:.|.||   || ::.|.|     :.|:......|:......:
plant   439 RKVVLTGTLFQNNVEEVFNILDLVRPKFLKRPGT-REIVSR-----IMSKAEIPRGKQVNQSSSS 497

  Fly  1568 MEALHRQVLPFLLRR-----VKEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLG 1627
            :|......:...|:|     .|..::||| .::|:::|               :.|..|....|.
plant   498 IEGTFFAAVELTLQRSTNFSAKASLIKDL-REMTRNIL---------------HYHKADFSGLLP 546

  Fly  1628 DSSSASMVTENLSA----------KTHIFQALRYLQNVCNHPKLVLRQSEELTKVTSQLALSNSS 1682
            ..|..:::. |||:          |..:|:.:.....:..||||.....|..:......:.:|::
plant   547 GLSEFTVML-NLSSIQRDEVKGLRKMELFKQISLGAALYIHPKLKSFLEENPSNGEKGFSDNNTT 610

  Fly  1683 ---LD------DIEHSAKLPALKQLLLDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLRRHL 1738
               ||      ::....|:.....||..|      ||..: :.|:|.|.     ||....|.|.:
plant   611 VMKLDKMLKKINVRDGVKMKFFLNLLALC------ESTGE-KLLVFSQY-----IVPIKTLERLM 663

  Fly  1739 PSVTYLRL-------DGSVPASQRQDIVNNFNSDPSIDVLLLTTMVGGLGLNLTGADTVIFVEHD 1796
            .|:...||       .|.....||:..:..||:.....|...:....|.|::|.||..|:.::..
plant   664 SSMKGWRLGKEMFTITGDSSNEQREWSMERFNNSLEAKVFFGSIKACGEGISLVGASRVLILDVH 728

  Fly  1797 WNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKIMGLQKFKILTANTVVSAENASLQTMGTS 1861
            .||....||:.||:|.|||:.|..|:|:..:|.||:                :.|..:.:.|.:.
plant   729 LNPSVTQQAVARAYRPGQKRKVYAYKLVAADSPEEE----------------NYETCTRKEMMSK 777

  Fly  1862 QIFDLFNGGKDKGAESGSSAVQGTASGGMSMNT 1894
            ..|: :|.|..: .:.|..|:....||...:.|
plant   778 MWFE-WNVGSGR-EDFGFRAIDADHSGDAFLET 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 133/571 (23%)
CHR34NP_001325209.1 HepA <271..772 CDD:440319 134/578 (23%)
DEAD-like_helicase_N 272..486 CDD:475120 61/246 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.