DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hel89B and Rad54b

DIOPT Version :10

Sequence 1:NP_732097.2 Gene:Hel89B / 41943 FlyBaseID:FBgn0022787 Length:1923 Species:Drosophila melanogaster
Sequence 2:NP_001034645.1 Gene:Rad54b / 623474 MGIID:3605986 Length:886 Species:Mus musculus


Alignment Length:627 Identity:184/627 - (29%)
Similarity:296/627 - (47%) Gaps:117/627 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1281 MSDPDES-VRLLSTHCFANLVQLMPLDGKTEQLKSDPLQARKTRDREFLDYLFNPKSIPNYKVPV 1344
            |..|||: .|:.:.||                   .|:          :|.:.:|..:.:     
Mouse   243 MPRPDENHQRMFNRHC-------------------SPI----------VDVVIDPHLVHH----- 273

  Fly  1345 PISVELRCYQQAGINWLW-------FLNKYNLHGILCDDMGLGKTLQTICIL---------AGDH 1393
                 ||.:|:.||.:|:       .:.|..  .||.|:||||||||.|.::         .|..
Mouse   274 -----LRPHQKDGIIFLYECVMGMRAVGKCG--AILADEMGLGKTLQCISLIWTLQCQGPYGGKP 331

  Fly  1394 MHRQTANLANLPSLVICPPTLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGRE-KLRSDI-GTKCN 1456
            :.::|        |::.|.:|..:|..|.:|:|  ||....:    |.|.:: |:...| .|..:
Mouse   332 VIKKT--------LIVTPGSLVNNWRKEFQKWL--GSERIKI----FTVDQDHKVEEFINSTFHS 382

  Fly  1457 LVVASYDTVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLE 1521
            :::.||:.:.:.:|....|.|...:.||||.:||...|::.|:..|.....:||:|||:||::.|
Mouse   383 VLIISYEMLLRSLDQIKTIPFGLLICDEGHRLKNSSIKTTTALSSLSCEKTVILTGTPVQNDLQE 447

  Fly  1522 LWSLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRVKED 1586
            .::|.||:.||.||:...:.:.:..||:.||:..||.:|:|.|......|.|....|:|||.:|.
Mouse   448 FFALVDFVNPGILGSLSSYRKIYEEPIIISREPSSSKEERELGERRATELTRLTGRFILRRTQEV 512

  Fly  1587 VLKDLPPKITQDLLCELSPLQLRLYED-FSNKHLKDCLDKLGDSSSASMVTENLSAKTHIFQALR 1650
            :.|.|||||...:.|....||:.||.. ..::.::.||..|.::|:            |:. .:.
Mouse   513 INKYLPPKIENVVFCRPGALQIELYRKLLRSQSVRFCLQGLLENSA------------HLI-CIG 564

  Fly  1651 YLQNVCNHPKLVL------------RQSEELTKVTSQLALSNSSLDDI----EHSAKLPALKQLL 1699
            .|:.:||||.|:.            .::||.......|::..:..:.:    |.|.||..|.:||
Mouse   565 ALKKLCNHPCLLFSSVKGKEFSSSCEENEERNLCQGLLSVFPAGYNPLQFSEEESGKLQVLVKLL 629

  Fly  1700 LDCGIGVQTESVSQHRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNS 1764
                 .|..|.....:.::....:..|:::| ::.:||  .....||||..|.||||.||::|||
Mouse   630 -----AVIHELRPTEKVILVSNYRQTLNVLE-EVCKRH--GYACARLDGQTPVSQRQHIVDSFNS 686

  Fly  1765 DPSID-VLLLTTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNS 1828
            ..|.| :.||::..||:||||.|...:|..:.||||..|:|||.|..|.|||..|::|||:|..:
Mouse   687 KYSTDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGT 751

  Fly  1829 LEEKIMGLQKFKILTANTVV----SAENASLQTMGTSQIFDL 1866
            :||||...|..|...:..||    |:|:..........:|.|
Mouse   752 IEEKIYQRQISKQGLSGAVVDLTRSSEHIQFSVEELKNLFTL 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hel89BNP_732097.2 HEAT repeat 5..30 CDD:293787
HEAT repeat 42..70 CDD:293787
HEAT repeat 395..420 CDD:293787
HEAT repeat 433..465 CDD:293787
HEAT repeat 475..504 CDD:293787
HEAT repeat 516..540 CDD:293787
HEAT repeat 560..589 CDD:293787
DUF3535 654..1138 CDD:463447
HepA <1342..1849 CDD:440319 170/546 (31%)
Rad54bNP_001034645.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..95
HepA <274..772 CDD:440319 169/534 (32%)
DEXHc_RAD54B 274..508 CDD:350824 77/249 (31%)
DEGH box 409..412 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.

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